Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 RBMXP1-201ENST00000408004 1191 ntBASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 AC008494.1-201ENST00000497612 796 ntBASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 RNA5SP288-201ENST00000516075 93 ntBASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 AC004466.2-201ENST00000614749 516 ntBASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 AC006328.1-201ENST00000437571 379 ntBASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC20.73■□□□□ 0.91
CDC42BPAQ5VT25 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 MST1P2-201ENST00000457982 2291 ntBASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 FAU-201ENST00000279259 461 ntTSL 2 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 HNRNPA1P25-201ENST00000422644 937 ntBASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 AP000533.1-201ENST00000456143 1177 ntBASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 IGHVII-74-1-201ENST00000517572 241 ntBASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 PIGCP1-201ENST00000527583 895 ntBASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 RN7SL162P-201ENST00000579233 292 ntBASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 AC020763.3-201ENST00000625095 2904 ntBASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDC42BPAQ5VT25 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 RHOQP2-201ENST00000449922 579 ntBASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 SNORA47-201ENST00000458862 138 ntBASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 LY6E-215ENST00000523847 427 ntTSL 3 BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 MBP-230ENST00000528160 584 ntTSL 5 BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDC42BPAQ5VT25 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC20.7■□□□□ 0.91
CDC42BPAQ5VT25 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AL359092.2-201ENST00000423330 585 ntBASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 RPL35P1-201ENST00000450819 370 ntBASIC20.7■□□□□ 0.9
CDC42BPAQ5VT25 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms