Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 AC134312.5-201ENST00000568031 1313 ntBASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM55Q9BYV6 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 AC093433.1-201ENST00000458048 571 ntBASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 AC009486.1-201ENST00000569860 813 ntBASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 NCLP1-201ENST00000445357 1963 ntBASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRIM55Q9BYV6 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 BCYRN1-201ENST00000418539 200 ntBASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 AC012441.1-201ENST00000446669 685 ntBASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 AC099548.2-209ENST00000480264 625 ntBASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 AC244093.1-201ENST00000610837 814 ntBASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRIM55Q9BYV6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms