Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 SNRPCP15-201ENST00000424055 192 ntBASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 YBX1P3-201ENST00000468366 909 ntBASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 POP5-201ENST00000341039 913 ntTSL 2 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AC104212.2-201ENST00000478813 628 ntBASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 IGHVII-74-1-201ENST00000517572 241 ntBASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 CETN3-205ENST00000522842 664 ntTSL 2 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AC087072.1-201ENST00000603727 421 ntBASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AP006248.1-201ENST00000610471 67 ntBASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 DDC-212ENST00000615193 1674 ntTSL 3 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 Z82244.1-201ENST00000631502 840 ntBASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC17.72■□□□□ 0.43
SHANK3Q9BYB0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHANK3Q9BYB0 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC17.71■□□□□ 0.42
SHANK3Q9BYB0 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SHANK3Q9BYB0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SHANK3Q9BYB0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.71■□□□□ 0.42
SHANK3Q9BYB0 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 RPL35P1-201ENST00000450819 370 ntBASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 SNORA47-201ENST00000458862 138 ntBASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 DDX11L8-201ENST00000535849 366 ntBASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 AC023051.2-201ENST00000541141 460 ntBASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC17.7■□□□□ 0.42
SHANK3Q9BYB0 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms