Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.15■□□□□ 0.02
ATP2A3Q93084 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ATP2A3Q93084 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATP2A3Q93084 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATP2A3Q93084 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATP2A3Q93084 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ATP2A3Q93084 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATP2A3Q93084 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ATP2A3Q93084 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.15■□□□□ 0.02
ATP2A3Q93084 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ATP2A3Q93084 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 MIR33B-201ENST00000385104 96 ntBASIC15.14■□□□□ 0.01
ATP2A3Q93084 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 AC073150.1-201ENST00000450406 1084 ntBASIC15.14■□□□□ 0.01
ATP2A3Q93084 CEP164P1-201ENST00000455142 418 ntBASIC15.14■□□□□ 0.01
ATP2A3Q93084 RPS2P36-201ENST00000456516 831 ntBASIC15.14■□□□□ 0.01
ATP2A3Q93084 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 IGLV3-15-201ENST00000518356 244 ntBASIC15.14■□□□□ 0.01
ATP2A3Q93084 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 AL157813.1-201ENST00000612996 587 ntBASIC15.14■□□□□ 0.01
ATP2A3Q93084 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 AC092053.3-201ENST00000641308 4975 ntBASIC15.14■□□□□ 0.01
ATP2A3Q93084 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 AL928921.2-201ENST00000641325 2442 ntBASIC15.14■□□□□ 0.01
ATP2A3Q93084 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ATP2A3Q93084 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.14■□□□□ 0.01
ATP2A3Q93084 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 315.2 ms