Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 POM121L6P-201ENST00000441186 1826 ntBASIC10.14□□□□□ -0.79
CKS1BP61024 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.14□□□□□ -0.79
CKS1BP61024 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.14□□□□□ -0.79
CKS1BP61024 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.14□□□□□ -0.79
CKS1BP61024 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 AC026150.2-201ENST00000564693 1156 ntBASIC10.14□□□□□ -0.79
CKS1BP61024 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.14□□□□□ -0.79
CKS1BP61024 AC021517.1-202ENST00000585897 2111 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC10.14□□□□□ -0.79
CKS1BP61024 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 AC015802.1-201ENST00000588104 1449 ntBASIC10.14□□□□□ -0.79
CKS1BP61024 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
CKS1BP61024 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.14□□□□□ -0.79
CKS1BP61024 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CKS1BP61024 AC018665.1-201ENST00000622927 1362 ntBASIC10.14□□□□□ -0.79
CKS1BP61024 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC10.13□□□□□ -0.79
CKS1BP61024 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.13□□□□□ -0.79
CKS1BP61024 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC10.13□□□□□ -0.79
CKS1BP61024 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
CKS1BP61024 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
CKS1BP61024 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
CKS1BP61024 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
CKS1BP61024 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC10.13□□□□□ -0.79
CKS1BP61024 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC10.13□□□□□ -0.79
CKS1BP61024 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC10.13□□□□□ -0.79
CKS1BP61024 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.13□□□□□ -0.79
CKS1BP61024 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CKS1BP61024 AC104457.1-201ENST00000401024 814 ntBASIC10.13□□□□□ -0.79
CKS1BP61024 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.13□□□□□ -0.79
CKS1BP61024 FAM58DP-201ENST00000428076 619 ntBASIC10.13□□□□□ -0.79
CKS1BP61024 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC10.13□□□□□ -0.79
CKS1BP61024 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.13□□□□□ -0.79
CKS1BP61024 ALG1L5P-201ENST00000482043 771 ntBASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms