Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A5P29400 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A5P29400 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A5P29400 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A5P29400 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
COL4A5P29400 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A5P29400 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC16.54■□□□□ 0.24
COL4A5P29400 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A5P29400 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.54■□□□□ 0.24
COL4A5P29400 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC16.53■□□□□ 0.24
COL4A5P29400 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
COL4A5P29400 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 RBMXP1-201ENST00000408004 1191 ntBASIC16.53■□□□□ 0.24
COL4A5P29400 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 AC254633.1-201ENST00000606790 345 ntBASIC16.53■□□□□ 0.24
COL4A5P29400 AC137723.2-201ENST00000623540 398 ntBASIC16.53■□□□□ 0.24
COL4A5P29400 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
COL4A5P29400 CICP16-201ENST00000502609 2813 ntBASIC16.53■□□□□ 0.24
COL4A5P29400 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
COL4A5P29400 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
COL4A5P29400 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COL4A5P29400 AC097359.2-201ENST00000604992 2389 ntBASIC16.53■□□□□ 0.24
COL4A5P29400 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
COL4A5P29400 RCC2P5-201ENST00000492126 1487 ntBASIC16.53■□□□□ 0.24
COL4A5P29400 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 CRIP1P2-201ENST00000425396 228 ntBASIC16.53■□□□□ 0.24
COL4A5P29400 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 AC015818.1-201ENST00000451011 244 ntBASIC16.53■□□□□ 0.24
COL4A5P29400 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 AC022447.5-201ENST00000504817 392 ntBASIC16.53■□□□□ 0.24
COL4A5P29400 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 CETN3-205ENST00000522842 664 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A5P29400 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC16.53■□□□□ 0.24
COL4A5P29400 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC16.53■□□□□ 0.24
COL4A5P29400 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
COL4A5P29400 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
COL4A5P29400 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
COL4A5P29400 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A5P29400 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A5P29400 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A5P29400 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A5P29400 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A5P29400 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A5P29400 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A5P29400 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
COL4A5P29400 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A5P29400 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.52■□□□□ 0.24
COL4A5P29400 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.52■□□□□ 0.24
COL4A5P29400 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A5P29400 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A5P29400 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL4A5P29400 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.52■□□□□ 0.24
COL4A5P29400 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A5P29400 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A5P29400 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A5P29400 MIR339-201ENST00000362153 94 ntBASIC16.52■□□□□ 0.23
COL4A5P29400 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A5P29400 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A5P29400 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC16.52■□□□□ 0.23
COL4A5P29400 HLA-W-207ENST00000439514 771 ntBASIC16.52■□□□□ 0.23
COL4A5P29400 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC16.52■□□□□ 0.23
COL4A5P29400 SNORA47-201ENST00000458862 138 ntBASIC16.52■□□□□ 0.23
COL4A5P29400 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC16.52■□□□□ 0.23
COL4A5P29400 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC16.52■□□□□ 0.23
COL4A5P29400 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
COL4A5P29400 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC16.52■□□□□ 0.23
COL4A5P29400 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC16.52■□□□□ 0.23
COL4A5P29400 AC008622.3-201ENST00000621170 600 ntBASIC16.52■□□□□ 0.23
COL4A5P29400 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A5P29400 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.52■□□□□ 0.23
COL4A5P29400 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A5P29400 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A5P29400 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL4A5P29400 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC16.52■□□□□ 0.23
COL4A5P29400 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL4A5P29400 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL4A5P29400 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms