Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATF3P18847 JPT2-203ENST00000382711 894 ntTSL 4 BASIC19.2■□□□□ 0.66
ATF3P18847 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATF3P18847 SNU13-204ENST00000402458 462 ntTSL 3 BASIC19.2■□□□□ 0.66
ATF3P18847 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC19.2■□□□□ 0.66
ATF3P18847 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC19.2■□□□□ 0.66
ATF3P18847 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC19.2■□□□□ 0.66
ATF3P18847 CD44-224ENST00000526669 870 ntTSL 5 BASIC19.2■□□□□ 0.66
ATF3P18847 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC19.2■□□□□ 0.66
ATF3P18847 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC19.2■□□□□ 0.66
ATF3P18847 GARS-210ENST00000627489 324 ntTSL 4 BASIC19.2■□□□□ 0.66
ATF3P18847 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC19.2■□□□□ 0.66
ATF3P18847 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATF3P18847 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.2■□□□□ 0.66
ATF3P18847 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
ATF3P18847 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATF3P18847 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.2■□□□□ 0.66
ATF3P18847 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF3P18847 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ATF3P18847 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 DOC2GP-204ENST00000639052 2548 ntBASIC19.19■□□□□ 0.66
ATF3P18847 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATF3P18847 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 YY1P2-201ENST00000438766 948 ntBASIC19.19■□□□□ 0.66
ATF3P18847 OR4C14P-201ENST00000440929 923 ntBASIC19.19■□□□□ 0.66
ATF3P18847 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC19.19■□□□□ 0.66
ATF3P18847 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ATF3P18847 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 AC138035.3-201ENST00000622706 2791 ntBASIC19.19■□□□□ 0.66
ATF3P18847 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF3P18847 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATF3P18847 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
ATF3P18847 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ATF3P18847 AL137077.2-201ENST00000635124 1608 ntBASIC19.18■□□□□ 0.66
ATF3P18847 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATF3P18847 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 TPT1P9-201ENST00000413759 514 ntBASIC19.18■□□□□ 0.66
ATF3P18847 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC19.18■□□□□ 0.66
ATF3P18847 AC092865.2-201ENST00000439409 971 ntBASIC19.18■□□□□ 0.66
ATF3P18847 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF3P18847 RNA5SP420-201ENST00000516997 137 ntBASIC19.18■□□□□ 0.66
ATF3P18847 SRPK2P-201ENST00000523408 1100 ntBASIC19.18■□□□□ 0.66
ATF3P18847 MST1L-204ENST00000545160 559 ntTSL 4 BASIC19.18■□□□□ 0.66
ATF3P18847 PHBP18-201ENST00000546648 813 ntBASIC19.18■□□□□ 0.66
ATF3P18847 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF3P18847 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF3P18847 AC087072.1-201ENST00000603727 421 ntBASIC19.18■□□□□ 0.66
ATF3P18847 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF3P18847 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC19.18■□□□□ 0.66
ATF3P18847 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC19.18■□□□□ 0.66
ATF3P18847 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATF3P18847 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ATF3P18847 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATF3P18847 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC19.18■□□□□ 0.66
ATF3P18847 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF3P18847 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms