Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 DPM3-202ENST00000368399 517 ntBASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 MIR4538-201ENST00000581377 78 ntBASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 AC021016.3-201ENST00000608367 477 ntBASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 RN7SL832P-201ENST00000607781 1756 ntBASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PARPBPQ9NWS1 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 AC064801.2-201ENST00000625052 1303 ntBASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 KRT8P13-201ENST00000463294 1010 ntBASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 AC091804.1-201ENST00000486888 567 ntBASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 AC006122.1-201ENST00000493323 440 ntBASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 HLA-J-204ENST00000495278 958 ntBASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 AC013355.1-201ENST00000562625 723 ntBASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 AC068587.8-201ENST00000641239 219 ntBASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PARPBPQ9NWS1 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms