Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RAPH1Q70E73 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.49□□□□□ -0.09
RAPH1Q70E73 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.49□□□□□ -0.09
RAPH1Q70E73 RNA5SP486-201ENST00000515961 83 ntBASIC14.49□□□□□ -0.09
RAPH1Q70E73 AP001889.1-201ENST00000525414 633 ntBASIC14.49□□□□□ -0.09
RAPH1Q70E73 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RAPH1Q70E73 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
RAPH1Q70E73 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
RAPH1Q70E73 AC025279.2-201ENST00000569730 653 ntBASIC14.49□□□□□ -0.09
RAPH1Q70E73 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.49□□□□□ -0.09
RAPH1Q70E73 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RAPH1Q70E73 AL118506.1-201ENST00000601296 3082 ntBASIC14.49□□□□□ -0.09
RAPH1Q70E73 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.49□□□□□ -0.09
RAPH1Q70E73 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.49□□□□□ -0.09
RAPH1Q70E73 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAPH1Q70E73 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 AL022313.4-201ENST00000562756 2046 ntBASIC14.48□□□□□ -0.09
RAPH1Q70E73 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.48□□□□□ -0.09
RAPH1Q70E73 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 AC004945.1-201ENST00000416738 983 ntBASIC14.48□□□□□ -0.09
RAPH1Q70E73 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 AL590640.2-201ENST00000457038 527 ntBASIC14.48□□□□□ -0.09
RAPH1Q70E73 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 RPSAP52-203ENST00000622976 1023 ntBASIC14.48□□□□□ -0.09
RAPH1Q70E73 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAPH1Q70E73 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
RAPH1Q70E73 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.47□□□□□ -0.09
RAPH1Q70E73 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.47□□□□□ -0.09
RAPH1Q70E73 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAPH1Q70E73 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 AL354989.2-201ENST00000435838 1540 ntBASIC14.47□□□□□ -0.09
RAPH1Q70E73 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.47□□□□□ -0.09
RAPH1Q70E73 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.47□□□□□ -0.09
RAPH1Q70E73 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.47□□□□□ -0.09
RAPH1Q70E73 AL161932.2-201ENST00000435436 679 ntBASIC14.47□□□□□ -0.09
RAPH1Q70E73 RN7SL752P-201ENST00000463779 287 ntBASIC14.47□□□□□ -0.09
RAPH1Q70E73 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.47□□□□□ -0.09
RAPH1Q70E73 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
RAPH1Q70E73 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAPH1Q70E73 MIR4683-201ENST00000579659 81 ntBASIC14.47□□□□□ -0.09
RAPH1Q70E73 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAPH1Q70E73 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.47□□□□□ -0.09
RAPH1Q70E73 AC114271.1-201ENST00000612689 2813 ntBASIC14.47□□□□□ -0.09
RAPH1Q70E73 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms