Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 DNM1P30-201ENST00000563586 452 ntBASIC15.21■□□□□ 0.03
VARS2Q5ST30 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 MTCYBP28-201ENST00000566728 1132 ntBASIC15.21■□□□□ 0.03
VARS2Q5ST30 AC097376.1-201ENST00000602907 997 ntBASIC15.21■□□□□ 0.03
VARS2Q5ST30 MIR6756-201ENST00000616240 63 ntBASIC15.21■□□□□ 0.03
VARS2Q5ST30 AL109924.4-201ENST00000623089 670 ntBASIC15.21■□□□□ 0.03
VARS2Q5ST30 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
VARS2Q5ST30 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
VARS2Q5ST30 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.21■□□□□ 0.02
VARS2Q5ST30 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.02
VARS2Q5ST30 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.21■□□□□ 0.02
VARS2Q5ST30 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
VARS2Q5ST30 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VARS2Q5ST30 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.21■□□□□ 0.02
VARS2Q5ST30 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
VARS2Q5ST30 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VARS2Q5ST30 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
VARS2Q5ST30 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 AL162385.1-201ENST00000451595 1202 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 AC016550.3-201ENST00000515706 767 ntBASIC15.2■□□□□ 0.02
VARS2Q5ST30 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 AC025262.2-201ENST00000623975 1056 ntBASIC15.2■□□□□ 0.02
VARS2Q5ST30 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VARS2Q5ST30 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VARS2Q5ST30 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VARS2Q5ST30 AC083799.1-201ENST00000366451 910 ntBASIC15.19■□□□□ 0.02
VARS2Q5ST30 Z69890.1-201ENST00000382990 339 ntBASIC15.19■□□□□ 0.02
VARS2Q5ST30 ATG10-IT1-201ENST00000396880 487 ntBASIC15.19■□□□□ 0.02
VARS2Q5ST30 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.19■□□□□ 0.02
VARS2Q5ST30 ZNF885P-201ENST00000420174 1098 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms