Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
ACTA1P68133 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.82□□□□□ -0.36
ACTA1P68133 HMGN1P19-201ENST00000436976 333 ntBASIC12.82□□□□□ -0.36
ACTA1P68133 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 INE1-201ENST00000456273 945 ntBASIC12.82□□□□□ -0.36
ACTA1P68133 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTA1P68133 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.82□□□□□ -0.36
ACTA1P68133 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.82□□□□□ -0.36
ACTA1P68133 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.82□□□□□ -0.36
ACTA1P68133 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 AC027601.3-201ENST00000622907 509 ntBASIC12.82□□□□□ -0.36
ACTA1P68133 CR392039.2-201ENST00000623182 509 ntBASIC12.82□□□□□ -0.36
ACTA1P68133 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ACTA1P68133 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 AL138709.1-201ENST00000614840 1693 ntBASIC12.82□□□□□ -0.36
ACTA1P68133 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ACTA1P68133 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTA1P68133 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.82□□□□□ -0.36
ACTA1P68133 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ACTA1P68133 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.82□□□□□ -0.36
ACTA1P68133 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ACTA1P68133 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
ACTA1P68133 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.81□□□□□ -0.36
ACTA1P68133 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.81□□□□□ -0.36
ACTA1P68133 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 AL355102.3-201ENST00000554299 1678 ntBASIC12.81□□□□□ -0.36
ACTA1P68133 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 BAATP1-201ENST00000412284 1225 ntBASIC12.81□□□□□ -0.36
ACTA1P68133 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 FAM207CP-201ENST00000443486 507 ntBASIC12.81□□□□□ -0.36
ACTA1P68133 ELK1P1-201ENST00000485699 580 ntBASIC12.81□□□□□ -0.36
ACTA1P68133 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.81□□□□□ -0.36
ACTA1P68133 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.81□□□□□ -0.36
ACTA1P68133 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.81□□□□□ -0.36
ACTA1P68133 MIR4745-201ENST00000577608 62 ntBASIC12.81□□□□□ -0.36
ACTA1P68133 AC004233.3-201ENST00000607794 1269 ntBASIC12.81□□□□□ -0.36
ACTA1P68133 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ACTA1P68133 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
ACTA1P68133 AC134312.5-201ENST00000568031 1313 ntBASIC12.81□□□□□ -0.36
ACTA1P68133 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ACTA1P68133 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ACTA1P68133 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.8□□□□□ -0.36
ACTA1P68133 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ACTA1P68133 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ACTA1P68133 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ACTA1P68133 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.8□□□□□ -0.36
ACTA1P68133 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ACTA1P68133 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ACTA1P68133 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms