Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC4P56524 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HDAC4P56524 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC4P56524 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC4P56524 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC4P56524 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC4P56524 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC4P56524 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC4P56524 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HDAC4P56524 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC4P56524 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
HDAC4P56524 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.99□□□□□ -0.01
HDAC4P56524 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC4P56524 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
HDAC4P56524 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.99□□□□□ -0.01
HDAC4P56524 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HDAC4P56524 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HDAC4P56524 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HDAC4P56524 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
HDAC4P56524 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.98□□□□□ -0.01
HDAC4P56524 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.98□□□□□ -0.01
HDAC4P56524 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.98□□□□□ -0.01
HDAC4P56524 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.98□□□□□ -0.01
HDAC4P56524 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.98□□□□□ -0.01
HDAC4P56524 AC004898.1-201ENST00000451057 766 ntBASIC14.98□□□□□ -0.01
HDAC4P56524 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.98□□□□□ -0.01
HDAC4P56524 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 AC106794.1-201ENST00000506935 792 ntBASIC14.98□□□□□ -0.01
HDAC4P56524 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.98□□□□□ -0.01
HDAC4P56524 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
HDAC4P56524 AC013355.1-201ENST00000562625 723 ntBASIC14.98□□□□□ -0.01
HDAC4P56524 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.98□□□□□ -0.01
HDAC4P56524 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 AL132994.2-201ENST00000603120 687 ntBASIC14.98□□□□□ -0.01
HDAC4P56524 AL118558.3-201ENST00000607414 1079 ntBASIC14.98□□□□□ -0.01
HDAC4P56524 LINC02486-201ENST00000604157 3000 ntBASIC14.98□□□□□ -0.01
HDAC4P56524 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HDAC4P56524 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HDAC4P56524 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC4P56524 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
HDAC4P56524 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC4P56524 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.97□□□□□ -0.01
HDAC4P56524 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HDAC4P56524 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
HDAC4P56524 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 FAM86MP-201ENST00000340703 885 ntBASIC14.97□□□□□ -0.01
HDAC4P56524 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.97□□□□□ -0.01
HDAC4P56524 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.97□□□□□ -0.01
HDAC4P56524 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC4P56524 AC005740.2-201ENST00000511085 419 ntBASIC14.97□□□□□ -0.01
HDAC4P56524 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.97□□□□□ -0.01
HDAC4P56524 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.97□□□□□ -0.01
HDAC4P56524 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HDAC4P56524 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC4P56524 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.97□□□□□ -0.01
HDAC4P56524 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.97□□□□□ -0.01
HDAC4P56524 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.97□□□□□ -0.01
HDAC4P56524 BAP1-211ENST00000615113 489 ntBASIC14.97□□□□□ -0.01
HDAC4P56524 AL136295.7-201ENST00000619226 1200 ntBASIC14.97□□□□□ -0.01
HDAC4P56524 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.97□□□□□ -0.01
HDAC4P56524 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.97□□□□□ -0.01
HDAC4P56524 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HDAC4P56524 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.97□□□□□ -0.01
HDAC4P56524 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms