Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 CYP4F23P-201ENST00000593402 1579 ntBASIC14.99□□□□□ -0.01
SLC1A1P43005 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.99□□□□□ -0.01
SLC1A1P43005 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC1A1P43005 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 AC234783.1-201ENST00000441761 496 ntBASIC14.99□□□□□ -0.01
SLC1A1P43005 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC1A1P43005 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC1A1P43005 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC1A1P43005 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC1A1P43005 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SLC1A1P43005 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC1A1P43005 AL162274.1-201ENST00000617191 1098 ntBASIC14.99□□□□□ -0.01
SLC1A1P43005 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SLC1A1P43005 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 AL359183.1-201ENST00000623796 2132 ntBASIC14.99□□□□□ -0.01
SLC1A1P43005 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC1A1P43005 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SLC1A1P43005 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC1A1P43005 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
SLC1A1P43005 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC1A1P43005 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
SLC1A1P43005 AC068760.1-201ENST00000493579 1953 ntBASIC14.98□□□□□ -0.01
SLC1A1P43005 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
SLC1A1P43005 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SLC1A1P43005 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC1A1P43005 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC1A1P43005 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
SLC1A1P43005 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC1A1P43005 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SLC1A1P43005 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.98□□□□□ -0.01
SLC1A1P43005 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC1A1P43005 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC1A1P43005 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SLC1A1P43005 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC1A1P43005 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.98□□□□□ -0.01
SLC1A1P43005 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC1A1P43005 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC1A1P43005 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC1A1P43005 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SLC1A1P43005 EEF1DP1-201ENST00000585891 896 ntBASIC14.98□□□□□ -0.01
SLC1A1P43005 AP000346.4-201ENST00000614827 381 ntBASIC14.98□□□□□ -0.01
SLC1A1P43005 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC1A1P43005 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 AC105233.6-201ENST00000642093 218 ntBASIC14.98□□□□□ -0.01
SLC1A1P43005 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC1A1P43005 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SLC1A1P43005 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 AL359845.1-201ENST00000458202 1648 ntBASIC14.98□□□□□ -0.01
SLC1A1P43005 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 DMBT1P1-203ENST00000636837 4628 ntBASIC14.98□□□□□ -0.01
SLC1A1P43005 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SLC1A1P43005 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SLC1A1P43005 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
SLC1A1P43005 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SLC1A1P43005 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC1A1P43005 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms