Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.95□□□□□ -0.34
APOBEC1P41238 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.95□□□□□ -0.34
APOBEC1P41238 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.95□□□□□ -0.34
APOBEC1P41238 EIF4HP1-201ENST00000453115 687 ntBASIC12.95□□□□□ -0.34
APOBEC1P41238 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.95□□□□□ -0.34
APOBEC1P41238 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.95□□□□□ -0.34
APOBEC1P41238 AC020914.3-201ENST00000594712 304 ntBASIC12.95□□□□□ -0.34
APOBEC1P41238 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.95□□□□□ -0.34
APOBEC1P41238 AC100757.4-201ENST00000626934 759 ntBASIC12.95□□□□□ -0.34
APOBEC1P41238 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
APOBEC1P41238 NAP1L6-202ENST00000641404 1222 ntBASIC12.95□□□□□ -0.34
APOBEC1P41238 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
APOBEC1P41238 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 RPL13AP3-202ENST00000494676 1473 ntBASIC12.95□□□□□ -0.34
APOBEC1P41238 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.94□□□□□ -0.34
APOBEC1P41238 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
APOBEC1P41238 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 KRT8P21-201ENST00000430398 1491 ntBASIC12.94□□□□□ -0.34
APOBEC1P41238 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.94□□□□□ -0.34
APOBEC1P41238 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.94□□□□□ -0.34
APOBEC1P41238 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 AC243960.2-201ENST00000600996 747 ntBASIC12.94□□□□□ -0.34
APOBEC1P41238 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 AC026740.1-201ENST00000607068 791 ntBASIC12.94□□□□□ -0.34
APOBEC1P41238 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 AC244452.3-201ENST00000636814 210 ntBASIC12.94□□□□□ -0.34
APOBEC1P41238 AL805961.1-203ENST00000641078 1258 ntBASIC12.94□□□□□ -0.34
APOBEC1P41238 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms