Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.19□□□□□ -0.3
RFC3P40938 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 MIR33B-201ENST00000385104 96 ntBASIC13.19□□□□□ -0.3
RFC3P40938 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.19□□□□□ -0.3
RFC3P40938 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RFC3P40938 FTLP1-201ENST00000449155 526 ntBASIC13.19□□□□□ -0.3
RFC3P40938 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.19□□□□□ -0.3
RFC3P40938 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.19□□□□□ -0.3
RFC3P40938 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.19□□□□□ -0.3
RFC3P40938 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.19□□□□□ -0.3
RFC3P40938 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
RFC3P40938 AC003686.1-201ENST00000550956 1034 ntBASIC13.19□□□□□ -0.3
RFC3P40938 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RFC3P40938 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.19□□□□□ -0.3
RFC3P40938 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.19□□□□□ -0.3
RFC3P40938 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.19□□□□□ -0.3
RFC3P40938 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.19□□□□□ -0.3
RFC3P40938 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.19□□□□□ -0.3
RFC3P40938 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
RFC3P40938 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RFC3P40938 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 AC027601.5-201ENST00000624065 2482 ntBASIC13.19□□□□□ -0.3
RFC3P40938 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
RFC3P40938 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RFC3P40938 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFC3P40938 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 AC027612.1-201ENST00000445234 2395 ntBASIC13.18□□□□□ -0.3
RFC3P40938 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.18□□□□□ -0.3
RFC3P40938 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 AC118758.2-201ENST00000614242 2813 ntBASIC13.18□□□□□ -0.3
RFC3P40938 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.18□□□□□ -0.3
RFC3P40938 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.18□□□□□ -0.3
RFC3P40938 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.18□□□□□ -0.3
RFC3P40938 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.18□□□□□ -0.3
RFC3P40938 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RFC3P40938 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.18□□□□□ -0.3
RFC3P40938 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.18□□□□□ -0.3
RFC3P40938 AC026320.2-201ENST00000434379 478 ntBASIC13.18□□□□□ -0.3
RFC3P40938 AC069218.1-201ENST00000435269 762 ntBASIC13.18□□□□□ -0.3
RFC3P40938 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.18□□□□□ -0.3
RFC3P40938 TMEM198B-204ENST00000484016 896 ntBASIC13.18□□□□□ -0.3
RFC3P40938 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 RN7SL67P-201ENST00000492147 296 ntBASIC13.18□□□□□ -0.3
RFC3P40938 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.18□□□□□ -0.3
RFC3P40938 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
RFC3P40938 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.18□□□□□ -0.3
RFC3P40938 AC026803.1-201ENST00000569130 274 ntBASIC13.18□□□□□ -0.3
RFC3P40938 AC124068.2-201ENST00000569473 1109 ntBASIC13.18□□□□□ -0.3
RFC3P40938 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.18□□□□□ -0.3
RFC3P40938 LINC01783-202ENST00000614408 828 ntBASIC13.18□□□□□ -0.3
RFC3P40938 BX284668.2-205ENST00000619677 828 ntBASIC13.18□□□□□ -0.3
RFC3P40938 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.18□□□□□ -0.3
RFC3P40938 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.18□□□□□ -0.3
RFC3P40938 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RFC3P40938 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.18□□□□□ -0.3
RFC3P40938 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RFC3P40938 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RFC3P40938 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RFC3P40938 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms