Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
FDFT1P37268 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.64□□□□□ -0.07
FDFT1P37268 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.64□□□□□ -0.07
FDFT1P37268 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 AC012645.4-201ENST00000610691 1061 ntBASIC14.64□□□□□ -0.07
FDFT1P37268 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.64□□□□□ -0.07
FDFT1P37268 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 AC005562.1-201ENST00000583030 3219 ntBASIC14.64□□□□□ -0.07
FDFT1P37268 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.64□□□□□ -0.07
FDFT1P37268 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.64□□□□□ -0.07
FDFT1P37268 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.64□□□□□ -0.07
FDFT1P37268 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.64□□□□□ -0.07
FDFT1P37268 AC144522.1-201ENST00000625111 1658 ntBASIC14.64□□□□□ -0.07
FDFT1P37268 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.64□□□□□ -0.07
FDFT1P37268 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
FDFT1P37268 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
FDFT1P37268 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.64□□□□□ -0.07
FDFT1P37268 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.64□□□□□ -0.07
FDFT1P37268 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
FDFT1P37268 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
FDFT1P37268 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.64□□□□□ -0.07
FDFT1P37268 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.63□□□□□ -0.07
FDFT1P37268 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.63□□□□□ -0.07
FDFT1P37268 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
FDFT1P37268 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.63□□□□□ -0.07
FDFT1P37268 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
FDFT1P37268 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
FDFT1P37268 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
FDFT1P37268 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.63□□□□□ -0.07
FDFT1P37268 HMGA1P1-201ENST00000415560 1062 ntBASIC14.63□□□□□ -0.07
FDFT1P37268 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.63□□□□□ -0.07
FDFT1P37268 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.63□□□□□ -0.07
FDFT1P37268 AC006122.1-201ENST00000493323 440 ntBASIC14.63□□□□□ -0.07
FDFT1P37268 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
FDFT1P37268 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.63□□□□□ -0.07
FDFT1P37268 AC003686.1-201ENST00000550956 1034 ntBASIC14.63□□□□□ -0.07
FDFT1P37268 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.63□□□□□ -0.07
FDFT1P37268 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.63□□□□□ -0.07
FDFT1P37268 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.63□□□□□ -0.07
FDFT1P37268 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.63□□□□□ -0.07
FDFT1P37268 AC005962.1-201ENST00000584100 773 ntBASIC14.63□□□□□ -0.07
FDFT1P37268 EEF1DP1-201ENST00000585891 896 ntBASIC14.63□□□□□ -0.07
FDFT1P37268 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.63□□□□□ -0.07
FDFT1P37268 LINC02486-201ENST00000604157 3000 ntBASIC14.63□□□□□ -0.07
FDFT1P37268 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 AL928654.5-201ENST00000624831 2501 ntBASIC14.63□□□□□ -0.07
FDFT1P37268 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.63□□□□□ -0.07
FDFT1P37268 PEG13-201ENST00000631594 5667 ntBASIC14.63□□□□□ -0.07
FDFT1P37268 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
FDFT1P37268 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.63□□□□□ -0.07
FDFT1P37268 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
FDFT1P37268 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
FDFT1P37268 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
FDFT1P37268 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
FDFT1P37268 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
FDFT1P37268 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
FDFT1P37268 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.62□□□□□ -0.07
FDFT1P37268 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
FDFT1P37268 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms