Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLCN1P35523 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 AC112176.1-201ENST00000565428 3024 ntBASIC16.37■□□□□ 0.21
CLCN1P35523 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.37■□□□□ 0.21
CLCN1P35523 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLCN1P35523 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN1P35523 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLCN1P35523 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CLCN1P35523 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN1P35523 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLCN1P35523 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN1P35523 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC16.36■□□□□ 0.21
CLCN1P35523 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLCN1P35523 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLCN1P35523 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CLCN1P35523 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN1P35523 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLCN1P35523 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLCN1P35523 AC098850.1-201ENST00000419919 790 ntBASIC16.36■□□□□ 0.21
CLCN1P35523 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN1P35523 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.36■□□□□ 0.21
CLCN1P35523 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.36■□□□□ 0.21
CLCN1P35523 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.36■□□□□ 0.21
CLCN1P35523 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN1P35523 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.36■□□□□ 0.21
CLCN1P35523 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN1P35523 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.36■□□□□ 0.21
CLCN1P35523 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLCN1P35523 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLCN1P35523 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN1P35523 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CLCN1P35523 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN1P35523 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 AC073862.5-201ENST00000624129 2027 ntBASIC16.35■□□□□ 0.21
CLCN1P35523 AL158070.2-201ENST00000623713 1621 ntBASIC16.35■□□□□ 0.21
CLCN1P35523 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CLCN1P35523 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN1P35523 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.35■□□□□ 0.21
CLCN1P35523 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.35■□□□□ 0.21
CLCN1P35523 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.35■□□□□ 0.21
CLCN1P35523 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.35■□□□□ 0.21
CLCN1P35523 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.35■□□□□ 0.21
CLCN1P35523 AC055876.2-201ENST00000531834 546 ntBASIC16.35■□□□□ 0.21
CLCN1P35523 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.35■□□□□ 0.21
CLCN1P35523 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 MEX3B-202ENST00000558133 4333 ntBASIC16.35■□□□□ 0.21
CLCN1P35523 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.35■□□□□ 0.21
CLCN1P35523 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLCN1P35523 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms