Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
COL6A2P12110 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
COL6A2P12110 AC103592.1-201ENST00000394513 664 ntBASIC14.19□□□□□ -0.14
COL6A2P12110 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.19□□□□□ -0.14
COL6A2P12110 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.19□□□□□ -0.14
COL6A2P12110 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.19□□□□□ -0.14
COL6A2P12110 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.19□□□□□ -0.14
COL6A2P12110 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.19□□□□□ -0.14
COL6A2P12110 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.19□□□□□ -0.14
COL6A2P12110 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
COL6A2P12110 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 CCT8L1P-201ENST00000465400 1674 ntBASIC14.19□□□□□ -0.14
COL6A2P12110 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.19□□□□□ -0.14
COL6A2P12110 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.19□□□□□ -0.14
COL6A2P12110 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.19□□□□□ -0.14
COL6A2P12110 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.19□□□□□ -0.14
COL6A2P12110 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
COL6A2P12110 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.19□□□□□ -0.14
COL6A2P12110 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL6A2P12110 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COL6A2P12110 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
COL6A2P12110 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 SHMT1P1-201ENST00000419974 1312 ntBASIC14.18□□□□□ -0.14
COL6A2P12110 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COL6A2P12110 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.18□□□□□ -0.14
COL6A2P12110 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COL6A2P12110 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.18□□□□□ -0.14
COL6A2P12110 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.18□□□□□ -0.14
COL6A2P12110 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 DMBT1P1-203ENST00000636837 4628 ntBASIC14.18□□□□□ -0.14
COL6A2P12110 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.18□□□□□ -0.14
COL6A2P12110 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 MIR1202-201ENST00000408529 83 ntBASIC14.18□□□□□ -0.14
COL6A2P12110 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.18□□□□□ -0.14
COL6A2P12110 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.18□□□□□ -0.14
COL6A2P12110 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.18□□□□□ -0.14
COL6A2P12110 AC124068.2-201ENST00000569473 1109 ntBASIC14.18□□□□□ -0.14
COL6A2P12110 MIR3197-201ENST00000582241 73 ntBASIC14.18□□□□□ -0.14
COL6A2P12110 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.18□□□□□ -0.14
COL6A2P12110 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
COL6A2P12110 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
COL6A2P12110 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
COL6A2P12110 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
COL6A2P12110 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
COL6A2P12110 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.18□□□□□ -0.14
COL6A2P12110 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
COL6A2P12110 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
COL6A2P12110 RCC2P1-201ENST00000452257 1476 ntBASIC14.18□□□□□ -0.14
COL6A2P12110 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.18□□□□□ -0.14
COL6A2P12110 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL6A2P12110 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
COL6A2P12110 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms