Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
GCM1Q9NP62 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GCM1Q9NP62 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GCM1Q9NP62 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
GCM1Q9NP62 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GCM1Q9NP62 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCM1Q9NP62 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.21■□□□□ 0.67
GCM1Q9NP62 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCM1Q9NP62 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GCM1Q9NP62 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCM1Q9NP62 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCM1Q9NP62 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCM1Q9NP62 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.21■□□□□ 0.67
GCM1Q9NP62 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.21■□□□□ 0.67
GCM1Q9NP62 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GCM1Q9NP62 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.21■□□□□ 0.67
GCM1Q9NP62 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.21■□□□□ 0.67
GCM1Q9NP62 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.21■□□□□ 0.67
GCM1Q9NP62 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GCM1Q9NP62 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GCM1Q9NP62 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCM1Q9NP62 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCM1Q9NP62 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GCM1Q9NP62 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCM1Q9NP62 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCM1Q9NP62 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
GCM1Q9NP62 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.2■□□□□ 0.66
GCM1Q9NP62 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.2■□□□□ 0.66
GCM1Q9NP62 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.2■□□□□ 0.66
GCM1Q9NP62 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCM1Q9NP62 ABCB10P4-201ENST00000566803 2184 ntBASIC19.2■□□□□ 0.66
GCM1Q9NP62 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GCM1Q9NP62 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GCM1Q9NP62 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GCM1Q9NP62 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GCM1Q9NP62 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.19■□□□□ 0.66
GCM1Q9NP62 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.19■□□□□ 0.66
GCM1Q9NP62 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.19■□□□□ 0.66
GCM1Q9NP62 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.19■□□□□ 0.66
GCM1Q9NP62 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GCM1Q9NP62 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GCM1Q9NP62 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.19■□□□□ 0.66
GCM1Q9NP62 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GCM1Q9NP62 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GCM1Q9NP62 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.18■□□□□ 0.66
GCM1Q9NP62 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.18■□□□□ 0.66
GCM1Q9NP62 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.18■□□□□ 0.66
GCM1Q9NP62 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.18■□□□□ 0.66
GCM1Q9NP62 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.18■□□□□ 0.66
GCM1Q9NP62 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GCM1Q9NP62 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GCM1Q9NP62 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GCM1Q9NP62 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GCM1Q9NP62 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GCM1Q9NP62 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.17■□□□□ 0.66
GCM1Q9NP62 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.17■□□□□ 0.66
GCM1Q9NP62 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.17■□□□□ 0.66
GCM1Q9NP62 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.17■□□□□ 0.66
GCM1Q9NP62 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GCM1Q9NP62 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GCM1Q9NP62 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GCM1Q9NP62 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
GCM1Q9NP62 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GCM1Q9NP62 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GCM1Q9NP62 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.16■□□□□ 0.66
GCM1Q9NP62 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GCM1Q9NP62 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.16■□□□□ 0.66
GCM1Q9NP62 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GCM1Q9NP62 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GCM1Q9NP62 AC093323.1-202ENST00000635031 2045 ntBASIC19.16■□□□□ 0.66
GCM1Q9NP62 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.16■□□□□ 0.66
GCM1Q9NP62 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GCM1Q9NP62 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.16■□□□□ 0.66
GCM1Q9NP62 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GCM1Q9NP62 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GCM1Q9NP62 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GCM1Q9NP62 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GCM1Q9NP62 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GCM1Q9NP62 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GCM1Q9NP62 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GCM1Q9NP62 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GCM1Q9NP62 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GCM1Q9NP62 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
GCM1Q9NP62 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GCM1Q9NP62 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GCM1Q9NP62 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GCM1Q9NP62 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GCM1Q9NP62 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.14■□□□□ 0.65
GCM1Q9NP62 AC131281.2-201ENST00000520478 145 ntBASIC19.14■□□□□ 0.65
GCM1Q9NP62 AL512631.2-201ENST00000604634 923 ntBASIC19.14■□□□□ 0.65
GCM1Q9NP62 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.14■□□□□ 0.65
GCM1Q9NP62 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GCM1Q9NP62 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GCM1Q9NP62 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GCM1Q9NP62 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GCM1Q9NP62 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GCM1Q9NP62 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GCM1Q9NP62 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.13■□□□□ 0.65
GCM1Q9NP62 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.13■□□□□ 0.65
GCM1Q9NP62 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms