Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.8■■□□□ 1.56
VPS16Q9H269 AF131216.4-201ENST00000638924 1588 ntBASIC24.8■■□□□ 1.56
VPS16Q9H269 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS16Q9H269 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.8■■□□□ 1.56
VPS16Q9H269 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS16Q9H269 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.8■■□□□ 1.56
VPS16Q9H269 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.79■■□□□ 1.56
VPS16Q9H269 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
VPS16Q9H269 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS16Q9H269 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS16Q9H269 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
VPS16Q9H269 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
VPS16Q9H269 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.79■■□□□ 1.56
VPS16Q9H269 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS16Q9H269 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS16Q9H269 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS16Q9H269 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
VPS16Q9H269 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.78■■□□□ 1.56
VPS16Q9H269 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
VPS16Q9H269 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.78■■□□□ 1.56
VPS16Q9H269 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.78■■□□□ 1.56
VPS16Q9H269 AC010980.1-201ENST00000587192 1142 ntBASIC24.78■■□□□ 1.56
VPS16Q9H269 EP400NL-214ENST00000641289 2402 ntBASIC24.78■■□□□ 1.56
VPS16Q9H269 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS16Q9H269 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
VPS16Q9H269 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VPS16Q9H269 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
VPS16Q9H269 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
VPS16Q9H269 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
VPS16Q9H269 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.77■■□□□ 1.56
VPS16Q9H269 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.77■■□□□ 1.56
VPS16Q9H269 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.77■■□□□ 1.56
VPS16Q9H269 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
VPS16Q9H269 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
VPS16Q9H269 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VPS16Q9H269 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VPS16Q9H269 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.77■■□□□ 1.56
VPS16Q9H269 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VPS16Q9H269 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
VPS16Q9H269 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
VPS16Q9H269 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
VPS16Q9H269 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
VPS16Q9H269 KRT18P24-201ENST00000344739 1156 ntBASIC24.76■■□□□ 1.55
VPS16Q9H269 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.76■■□□□ 1.55
VPS16Q9H269 MIR4281-201ENST00000580852 62 ntBASIC24.76■■□□□ 1.55
VPS16Q9H269 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
VPS16Q9H269 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
VPS16Q9H269 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
VPS16Q9H269 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.75■■□□□ 1.55
VPS16Q9H269 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 THA1P-201ENST00000590384 1145 ntBASIC24.75■■□□□ 1.55
VPS16Q9H269 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.75■■□□□ 1.55
VPS16Q9H269 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.75■■□□□ 1.55
VPS16Q9H269 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
VPS16Q9H269 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
VPS16Q9H269 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
VPS16Q9H269 AC074183.2-201ENST00000623112 922 ntBASIC24.74■■□□□ 1.55
VPS16Q9H269 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.74■■□□□ 1.55
VPS16Q9H269 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.74■■□□□ 1.55
VPS16Q9H269 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
VPS16Q9H269 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.74■■□□□ 1.55
VPS16Q9H269 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
VPS16Q9H269 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
VPS16Q9H269 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.73■■□□□ 1.55
VPS16Q9H269 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
VPS16Q9H269 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
VPS16Q9H269 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.73■■□□□ 1.55
VPS16Q9H269 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.73■■□□□ 1.55
VPS16Q9H269 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
VPS16Q9H269 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.73■■□□□ 1.55
VPS16Q9H269 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.72■■□□□ 1.55
VPS16Q9H269 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
VPS16Q9H269 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.72■■□□□ 1.55
VPS16Q9H269 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.72■■□□□ 1.55
VPS16Q9H269 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
VPS16Q9H269 TSPY13P-201ENST00000338964 914 ntBASIC24.72■■□□□ 1.55
VPS16Q9H269 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
VPS16Q9H269 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
VPS16Q9H269 AC079630.1-202ENST00000618127 1840 ntBASIC24.72■■□□□ 1.55
VPS16Q9H269 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
VPS16Q9H269 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS16Q9H269 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS16Q9H269 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS16Q9H269 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS16Q9H269 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS16Q9H269 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS16Q9H269 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
VPS16Q9H269 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
VPS16Q9H269 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
VPS16Q9H269 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.7■■□□□ 1.55
VPS16Q9H269 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.7■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms