Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 MIR638-201ENST00000385237 100 ntBASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.51■■□□□ 1.35
CDK5RAP1Q96SZ6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 AL136162.1-201ENST00000607711 1078 ntBASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 AC135279.3-201ENST00000610945 1311 ntBASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
CDK5RAP1Q96SZ6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
CDK5RAP1Q96SZ6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDK5RAP1Q96SZ6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
CDK5RAP1Q96SZ6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.49■■□□□ 1.35
CDK5RAP1Q96SZ6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CDK5RAP1Q96SZ6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.49■■□□□ 1.35
CDK5RAP1Q96SZ6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDK5RAP1Q96SZ6 PBX2P1-201ENST00000493219 1291 ntBASIC23.49■■□□□ 1.35
CDK5RAP1Q96SZ6 AC009086.3-201ENST00000623486 1008 ntBASIC23.49■■□□□ 1.35
CDK5RAP1Q96SZ6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
CDK5RAP1Q96SZ6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.48■■□□□ 1.35
CDK5RAP1Q96SZ6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDK5RAP1Q96SZ6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
CDK5RAP1Q96SZ6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDK5RAP1Q96SZ6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDK5RAP1Q96SZ6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDK5RAP1Q96SZ6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDK5RAP1Q96SZ6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDK5RAP1Q96SZ6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDK5RAP1Q96SZ6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDK5RAP1Q96SZ6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDK5RAP1Q96SZ6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDK5RAP1Q96SZ6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CDK5RAP1Q96SZ6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CDK5RAP1Q96SZ6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDK5RAP1Q96SZ6 AC004812.2-201ENST00000611079 2094 ntBASIC23.47■■□□□ 1.35
CDK5RAP1Q96SZ6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDK5RAP1Q96SZ6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.46■■□□□ 1.35
CDK5RAP1Q96SZ6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDK5RAP1Q96SZ6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDK5RAP1Q96SZ6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDK5RAP1Q96SZ6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
CDK5RAP1Q96SZ6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.46■■□□□ 1.35
CDK5RAP1Q96SZ6 AC019069.1-201ENST00000610008 1333 ntBASIC23.46■■□□□ 1.35
CDK5RAP1Q96SZ6 FP325331.1-202ENST00000623531 1380 ntBASIC23.46■■□□□ 1.35
CDK5RAP1Q96SZ6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
CDK5RAP1Q96SZ6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.45■■□□□ 1.34
CDK5RAP1Q96SZ6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDK5RAP1Q96SZ6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDK5RAP1Q96SZ6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDK5RAP1Q96SZ6 AC011298.3-201ENST00000615796 283 ntBASIC23.45■■□□□ 1.34
CDK5RAP1Q96SZ6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDK5RAP1Q96SZ6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.44■■□□□ 1.34
CDK5RAP1Q96SZ6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDK5RAP1Q96SZ6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CDK5RAP1Q96SZ6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDK5RAP1Q96SZ6 SERBP1P1-201ENST00000396021 1160 ntBASIC23.44■■□□□ 1.34
CDK5RAP1Q96SZ6 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.44■■□□□ 1.34
CDK5RAP1Q96SZ6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.44■■□□□ 1.34
CDK5RAP1Q96SZ6 AC024257.2-201ENST00000549699 147 ntBASIC23.44■■□□□ 1.34
CDK5RAP1Q96SZ6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.43■■□□□ 1.34
CDK5RAP1Q96SZ6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CDK5RAP1Q96SZ6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDK5RAP1Q96SZ6 EDA-201ENST00000338901 1233 ntBASIC23.43■■□□□ 1.34
CDK5RAP1Q96SZ6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.43■■□□□ 1.34
CDK5RAP1Q96SZ6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDK5RAP1Q96SZ6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.43■■□□□ 1.34
CDK5RAP1Q96SZ6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CDK5RAP1Q96SZ6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDK5RAP1Q96SZ6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDK5RAP1Q96SZ6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CDK5RAP1Q96SZ6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.42■■□□□ 1.34
CDK5RAP1Q96SZ6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.42■■□□□ 1.34
CDK5RAP1Q96SZ6 AC005837.3-201ENST00000612163 286 ntBASIC23.42■■□□□ 1.34
CDK5RAP1Q96SZ6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CDK5RAP1Q96SZ6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.42■■□□□ 1.34
CDK5RAP1Q96SZ6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDK5RAP1Q96SZ6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDK5RAP1Q96SZ6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDK5RAP1Q96SZ6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDK5RAP1Q96SZ6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.41■■□□□ 1.34
CDK5RAP1Q96SZ6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.41■■□□□ 1.34
CDK5RAP1Q96SZ6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDK5RAP1Q96SZ6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDK5RAP1Q96SZ6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDK5RAP1Q96SZ6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDK5RAP1Q96SZ6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms