Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.68■■□□□ 1.06
CNTNAP3BQ96NU0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CNTNAP3BQ96NU0 AL121749.1-202ENST00000609313 2153 ntBASIC21.67■■□□□ 1.06
CNTNAP3BQ96NU0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP3BQ96NU0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP3BQ96NU0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP3BQ96NU0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP3BQ96NU0 RPS2P52-201ENST00000469610 820 ntBASIC21.67■■□□□ 1.06
CNTNAP3BQ96NU0 IGHV3-19-201ENST00000521488 291 ntBASIC21.67■■□□□ 1.06
CNTNAP3BQ96NU0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.67■■□□□ 1.06
CNTNAP3BQ96NU0 ITM2C-210ENST00000620962 501 ntBASIC21.67■■□□□ 1.06
CNTNAP3BQ96NU0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.67■■□□□ 1.06
CNTNAP3BQ96NU0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 TPRG1LP1-201ENST00000598702 760 ntBASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3BQ96NU0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 AL596275.1-201ENST00000423464 877 ntBASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 AP006294.2-201ENST00000641667 209 ntBASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.65■■□□□ 1.06
CNTNAP3BQ96NU0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP3BQ96NU0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP3BQ96NU0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP3BQ96NU0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CNTNAP3BQ96NU0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 POU5F1P3-201ENST00000428824 1078 ntBASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP3BQ96NU0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 AC009102.2-201ENST00000606772 1639 ntBASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 AC069152.1-201ENST00000438030 544 ntBASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CNTNAP3BQ96NU0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 PRORSD1P-201ENST00000295112 541 ntBASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP3BQ96NU0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 TSPY6P-201ENST00000448518 926 ntBASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 AL121832.2-201ENST00000610979 668 ntBASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.61■■□□□ 1.05
CNTNAP3BQ96NU0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP3BQ96NU0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNTNAP3BQ96NU0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CNTNAP3BQ96NU0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
CNTNAP3BQ96NU0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.6■■□□□ 1.05
CNTNAP3BQ96NU0 AL138781.1-201ENST00000566567 1274 ntBASIC21.6■■□□□ 1.05
CNTNAP3BQ96NU0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.6■■□□□ 1.05
CNTNAP3BQ96NU0 AC009086.3-201ENST00000623486 1008 ntBASIC21.6■■□□□ 1.05
CNTNAP3BQ96NU0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.6■■□□□ 1.05
CNTNAP3BQ96NU0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms