Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC29.28■■■□□ 2.28
SMARCC1Q92922 AL354811.1-201ENST00000610286 706 ntBASIC29.28■■■□□ 2.28
SMARCC1Q92922 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29.28■■■□□ 2.28
SMARCC1Q92922 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
SMARCC1Q92922 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC29.27■■■□□ 2.28
SMARCC1Q92922 AC004911.1-201ENST00000416316 871 ntBASIC29.27■■■□□ 2.28
SMARCC1Q92922 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SMARCC1Q92922 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SMARCC1Q92922 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SMARCC1Q92922 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SMARCC1Q92922 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SMARCC1Q92922 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC29.26■■■□□ 2.27
SMARCC1Q92922 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC29.26■■■□□ 2.27
SMARCC1Q92922 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC29.26■■■□□ 2.27
SMARCC1Q92922 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.26■■■□□ 2.27
SMARCC1Q92922 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC29.25■■■□□ 2.27
SMARCC1Q92922 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCC1Q92922 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC29.25■■■□□ 2.27
SMARCC1Q92922 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC29.25■■■□□ 2.27
SMARCC1Q92922 DLX3-202ENST00000512495 834 ntTSL 2 BASIC29.25■■■□□ 2.27
SMARCC1Q92922 MIR6084-201ENST00000622012 110 ntBASIC29.25■■■□□ 2.27
SMARCC1Q92922 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCC1Q92922 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC29.25■■■□□ 2.27
SMARCC1Q92922 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.25■■■□□ 2.27
SMARCC1Q92922 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SMARCC1Q92922 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCC1Q92922 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCC1Q92922 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCC1Q92922 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC29.24■■■□□ 2.27
SMARCC1Q92922 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCC1Q92922 CCDC92B-201ENST00000575506 885 ntBASIC29.24■■■□□ 2.27
SMARCC1Q92922 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCC1Q92922 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
SMARCC1Q92922 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
SMARCC1Q92922 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
SMARCC1Q92922 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC29.23■■■□□ 2.27
SMARCC1Q92922 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC29.23■■■□□ 2.27
SMARCC1Q92922 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC29.22■■■□□ 2.27
SMARCC1Q92922 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCC1Q92922 ID1-201ENST00000376105 1233 ntBASIC29.22■■■□□ 2.27
SMARCC1Q92922 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCC1Q92922 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCC1Q92922 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
SMARCC1Q92922 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC29.22■■■□□ 2.27
SMARCC1Q92922 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
SMARCC1Q92922 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
SMARCC1Q92922 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMARCC1Q92922 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMARCC1Q92922 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMARCC1Q92922 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMARCC1Q92922 GXYLT1P2-201ENST00000433312 1230 ntBASIC29.21■■■□□ 2.27
SMARCC1Q92922 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC29.21■■■□□ 2.27
SMARCC1Q92922 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
SMARCC1Q92922 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC29.21■■■□□ 2.27
SMARCC1Q92922 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
SMARCC1Q92922 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC29.2■■■□□ 2.26
SMARCC1Q92922 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
SMARCC1Q92922 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC29.2■■■□□ 2.26
SMARCC1Q92922 NTF6G-201ENST00000591094 616 ntBASIC29.2■■■□□ 2.26
SMARCC1Q92922 ALDH1A3-203ENST00000557963 1670 ntBASIC29.2■■■□□ 2.26
SMARCC1Q92922 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
SMARCC1Q92922 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
SMARCC1Q92922 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SMARCC1Q92922 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
SMARCC1Q92922 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
SMARCC1Q92922 CEBPA-AS1-201ENST00000592982 2198 ntBASIC29.19■■■□□ 2.26
SMARCC1Q92922 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SMARCC1Q92922 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SMARCC1Q92922 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SMARCC1Q92922 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC29.18■■■□□ 2.26
SMARCC1Q92922 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC29.18■■■□□ 2.26
SMARCC1Q92922 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SMARCC1Q92922 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
SMARCC1Q92922 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
SMARCC1Q92922 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SMARCC1Q92922 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.17■■■□□ 2.26
SMARCC1Q92922 DUSP8P4-201ENST00000399538 1761 ntBASIC29.17■■■□□ 2.26
SMARCC1Q92922 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SMARCC1Q92922 VPS53-216ENST00000574029 585 ntTSL 4 BASIC29.17■■■□□ 2.26
SMARCC1Q92922 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SMARCC1Q92922 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
SMARCC1Q92922 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
SMARCC1Q92922 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SMARCC1Q92922 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SMARCC1Q92922 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SMARCC1Q92922 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC29.16■■■□□ 2.26
SMARCC1Q92922 AC133637.1-201ENST00000624115 1537 ntBASIC29.16■■■□□ 2.26
SMARCC1Q92922 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SMARCC1Q92922 KRT18P14-201ENST00000534205 1250 ntBASIC29.16■■■□□ 2.26
SMARCC1Q92922 TERF1P2-201ENST00000583350 1212 ntBASIC29.16■■■□□ 2.26
SMARCC1Q92922 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
SMARCC1Q92922 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.16■■■□□ 2.26
SMARCC1Q92922 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SMARCC1Q92922 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC29.15■■■□□ 2.26
SMARCC1Q92922 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC29.15■■■□□ 2.26
SMARCC1Q92922 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
SMARCC1Q92922 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
SMARCC1Q92922 LINC02228-203ENST00000641970 1355 ntBASIC29.14■■■□□ 2.26
SMARCC1Q92922 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.14■■■□□ 2.26
SMARCC1Q92922 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms