Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
TRIM41Q8WV44 AC093827.2-201ENST00000512654 315 ntBASIC38.91■■■■□ 3.82
TRIM41Q8WV44 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC38.91■■■■□ 3.82
TRIM41Q8WV44 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC38.9■■■■□ 3.82
TRIM41Q8WV44 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC38.9■■■■□ 3.82
TRIM41Q8WV44 AL022069.1-201ENST00000568025 1636 ntBASIC38.89■■■■□ 3.82
TRIM41Q8WV44 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
TRIM41Q8WV44 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
TRIM41Q8WV44 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC38.89■■■■□ 3.82
TRIM41Q8WV44 AC135731.1-201ENST00000569415 2548 ntBASIC38.89■■■■□ 3.82
TRIM41Q8WV44 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC38.89■■■■□ 3.82
TRIM41Q8WV44 STK32C-205ENST00000456004 607 ntTSL 2 BASIC38.89■■■■□ 3.82
TRIM41Q8WV44 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC38.89■■■■□ 3.82
TRIM41Q8WV44 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC38.88■■■■□ 3.81
TRIM41Q8WV44 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC38.88■■■■□ 3.81
TRIM41Q8WV44 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC38.88■■■■□ 3.81
TRIM41Q8WV44 MIR4767-201ENST00000582827 78 ntBASIC38.88■■■■□ 3.81
TRIM41Q8WV44 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC38.88■■■■□ 3.81
TRIM41Q8WV44 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC38.87■■■■□ 3.81
TRIM41Q8WV44 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC38.87■■■■□ 3.81
TRIM41Q8WV44 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC38.87■■■■□ 3.81
TRIM41Q8WV44 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
TRIM41Q8WV44 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
TRIM41Q8WV44 DUX4L2-201ENST00000561772 1275 ntBASIC38.86■■■■□ 3.81
TRIM41Q8WV44 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC38.86■■■■□ 3.81
TRIM41Q8WV44 DUX4L6-201ENST00000626483 1275 ntBASIC38.86■■■■□ 3.81
TRIM41Q8WV44 DUX4L1-201ENST00000627662 1275 ntBASIC38.86■■■■□ 3.81
TRIM41Q8WV44 DUX4L8-201ENST00000629013 1275 ntBASIC38.86■■■■□ 3.81
TRIM41Q8WV44 DUX4L3-201ENST00000630187 1275 ntBASIC38.86■■■■□ 3.81
TRIM41Q8WV44 DUX4L7-201ENST00000630678 1275 ntBASIC38.86■■■■□ 3.81
TRIM41Q8WV44 DUX4L5-201ENST00000630834 1275 ntBASIC38.86■■■■□ 3.81
TRIM41Q8WV44 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC38.86■■■■□ 3.81
TRIM41Q8WV44 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC38.86■■■■□ 3.81
TRIM41Q8WV44 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
TRIM41Q8WV44 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC38.85■■■■□ 3.81
TRIM41Q8WV44 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC38.85■■■■□ 3.81
TRIM41Q8WV44 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
TRIM41Q8WV44 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
TRIM41Q8WV44 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC38.84■■■■□ 3.81
TRIM41Q8WV44 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC38.84■■■■□ 3.81
TRIM41Q8WV44 TSPY20P-201ENST00000450910 630 ntBASIC38.84■■■■□ 3.81
TRIM41Q8WV44 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC38.84■■■■□ 3.81
TRIM41Q8WV44 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
TRIM41Q8WV44 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC38.84■■■■□ 3.81
TRIM41Q8WV44 TMEM202-AS1-202ENST00000565181 2325 ntBASIC38.84■■■■□ 3.81
TRIM41Q8WV44 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC38.83■■■■□ 3.81
TRIM41Q8WV44 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC38.83■■■■□ 3.81
TRIM41Q8WV44 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC38.83■■■■□ 3.81
TRIM41Q8WV44 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC38.83■■■■□ 3.81
TRIM41Q8WV44 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC38.83■■■■□ 3.81
TRIM41Q8WV44 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC38.83■■■■□ 3.81
TRIM41Q8WV44 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC38.83■■■■□ 3.81
TRIM41Q8WV44 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC38.83■■■■□ 3.81
TRIM41Q8WV44 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC38.83■■■■□ 3.81
TRIM41Q8WV44 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC38.83■■■■□ 3.81
TRIM41Q8WV44 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.8
TRIM41Q8WV44 CD37-213ENST00000598095 1598 ntTSL 2 BASIC38.82■■■■□ 3.8
TRIM41Q8WV44 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC38.82■■■■□ 3.8
TRIM41Q8WV44 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
TRIM41Q8WV44 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
TRIM41Q8WV44 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
TRIM41Q8WV44 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC38.81■■■■□ 3.8
TRIM41Q8WV44 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
TRIM41Q8WV44 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC38.81■■■■□ 3.8
TRIM41Q8WV44 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
TRIM41Q8WV44 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
TRIM41Q8WV44 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC38.8■■■■□ 3.8
TRIM41Q8WV44 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC38.8■■■■□ 3.8
TRIM41Q8WV44 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC38.8■■■■□ 3.8
TRIM41Q8WV44 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
TRIM41Q8WV44 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
TRIM41Q8WV44 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC38.8■■■■□ 3.8
TRIM41Q8WV44 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC38.8■■■■□ 3.8
TRIM41Q8WV44 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
TRIM41Q8WV44 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
TRIM41Q8WV44 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC38.79■■■■□ 3.8
TRIM41Q8WV44 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC38.79■■■■□ 3.8
TRIM41Q8WV44 DET1-205ENST00000558413 583 ntTSL 4 BASIC38.79■■■■□ 3.8
TRIM41Q8WV44 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC38.79■■■■□ 3.8
TRIM41Q8WV44 AK1-201ENST00000223836 736 ntTSL 3 BASIC38.78■■■■□ 3.8
TRIM41Q8WV44 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC38.78■■■■□ 3.8
TRIM41Q8WV44 GXYLT1P2-201ENST00000433312 1230 ntBASIC38.78■■■■□ 3.8
TRIM41Q8WV44 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC38.78■■■■□ 3.8
TRIM41Q8WV44 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
TRIM41Q8WV44 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
TRIM41Q8WV44 AC027682.1-201ENST00000562846 899 ntBASIC38.78■■■■□ 3.8
TRIM41Q8WV44 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
TRIM41Q8WV44 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC38.77■■■■□ 3.8
TRIM41Q8WV44 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC38.77■■■■□ 3.8
TRIM41Q8WV44 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC38.77■■■■□ 3.8
TRIM41Q8WV44 REST-206ENST00000612429 1376 ntTSL 5 BASIC38.77■■■■□ 3.8
TRIM41Q8WV44 REST-207ENST00000616975 1370 ntTSL 5 BASIC38.77■■■■□ 3.8
TRIM41Q8WV44 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
TRIM41Q8WV44 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC38.77■■■■□ 3.8
TRIM41Q8WV44 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC38.76■■■■□ 3.8
TRIM41Q8WV44 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC38.76■■■■□ 3.8
TRIM41Q8WV44 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC38.76■■■■□ 3.8
TRIM41Q8WV44 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC38.75■■■■□ 3.79
TRIM41Q8WV44 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
TRIM41Q8WV44 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC38.75■■■■□ 3.79
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms