Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SMARCC2Q8TAQ2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 AC004448.1-201ENST00000458332 883 ntBASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.52■■□□□ 1.84
SMARCC2Q8TAQ2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
SMARCC2Q8TAQ2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
SMARCC2Q8TAQ2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
SMARCC2Q8TAQ2 SNX5-217ENST00000606557 1087 ntBASIC26.51■■□□□ 1.83
SMARCC2Q8TAQ2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.51■■□□□ 1.83
SMARCC2Q8TAQ2 AC012676.1-201ENST00000574705 1949 ntBASIC26.51■■□□□ 1.83
SMARCC2Q8TAQ2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SMARCC2Q8TAQ2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SMARCC2Q8TAQ2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.5■■□□□ 1.83
SMARCC2Q8TAQ2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.5■■□□□ 1.83
SMARCC2Q8TAQ2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SMARCC2Q8TAQ2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.49■■□□□ 1.83
SMARCC2Q8TAQ2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.49■■□□□ 1.83
SMARCC2Q8TAQ2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMARCC2Q8TAQ2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.49■■□□□ 1.83
SMARCC2Q8TAQ2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMARCC2Q8TAQ2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SMARCC2Q8TAQ2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
SMARCC2Q8TAQ2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SMARCC2Q8TAQ2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SMARCC2Q8TAQ2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
SMARCC2Q8TAQ2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SMARCC2Q8TAQ2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.48■■□□□ 1.83
SMARCC2Q8TAQ2 C9orf163-202ENST00000624034 2573 ntBASIC26.48■■□□□ 1.83
SMARCC2Q8TAQ2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 DUSP8P3-201ENST00000399571 1760 ntBASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SMARCC2Q8TAQ2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SMARCC2Q8TAQ2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.46■■□□□ 1.83
SMARCC2Q8TAQ2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SMARCC2Q8TAQ2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.46■■□□□ 1.83
SMARCC2Q8TAQ2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.46■■□□□ 1.83
SMARCC2Q8TAQ2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SMARCC2Q8TAQ2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.45■■□□□ 1.83
SMARCC2Q8TAQ2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.45■■□□□ 1.83
SMARCC2Q8TAQ2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
SMARCC2Q8TAQ2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.83
SMARCC2Q8TAQ2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.45■■□□□ 1.82
SMARCC2Q8TAQ2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.45■■□□□ 1.82
SMARCC2Q8TAQ2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SMARCC2Q8TAQ2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SMARCC2Q8TAQ2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SMARCC2Q8TAQ2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMARCC2Q8TAQ2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.44■■□□□ 1.82
SMARCC2Q8TAQ2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMARCC2Q8TAQ2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.44■■□□□ 1.82
SMARCC2Q8TAQ2 MIR6724-1-201ENST00000616420 92 ntBASIC26.44■■□□□ 1.82
SMARCC2Q8TAQ2 MIR6724-2-201ENST00000616483 92 ntBASIC26.44■■□□□ 1.82
SMARCC2Q8TAQ2 MIR6724-4-201ENST00000617390 92 ntBASIC26.44■■□□□ 1.82
SMARCC2Q8TAQ2 MIR6724-3-201ENST00000622482 92 ntBASIC26.44■■□□□ 1.82
SMARCC2Q8TAQ2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
SMARCC2Q8TAQ2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SMARCC2Q8TAQ2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SMARCC2Q8TAQ2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SMARCC2Q8TAQ2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms