Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 AC139795.1-202ENST00000500444 432 ntBASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE1Q8N0S2 GUSBP5-202ENST00000510805 1989 ntBASIC23.83■■□□□ 1.41
SYCE1Q8N0S2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.83■■□□□ 1.41
SYCE1Q8N0S2 EP400NL-214ENST00000641289 2402 ntBASIC23.83■■□□□ 1.41
SYCE1Q8N0S2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SYCE1Q8N0S2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SYCE1Q8N0S2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.83■■□□□ 1.41
SYCE1Q8N0S2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SYCE1Q8N0S2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.83■■□□□ 1.4
SYCE1Q8N0S2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SYCE1Q8N0S2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.83■■□□□ 1.4
SYCE1Q8N0S2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SYCE1Q8N0S2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.83■■□□□ 1.4
SYCE1Q8N0S2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE1Q8N0S2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SYCE1Q8N0S2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE1Q8N0S2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.82■■□□□ 1.4
SYCE1Q8N0S2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE1Q8N0S2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE1Q8N0S2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE1Q8N0S2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE1Q8N0S2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE1Q8N0S2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE1Q8N0S2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE1Q8N0S2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE1Q8N0S2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.8■■□□□ 1.4
SYCE1Q8N0S2 HSD17B1P1-201ENST00000590052 955 ntBASIC23.8■■□□□ 1.4
SYCE1Q8N0S2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE1Q8N0S2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SYCE1Q8N0S2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 LINC00526-201ENST00000581067 1875 ntBASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 ECEL1P1-201ENST00000373592 1742 ntBASIC23.79■■□□□ 1.4
SYCE1Q8N0S2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
SYCE1Q8N0S2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYCE1Q8N0S2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SYCE1Q8N0S2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYCE1Q8N0S2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYCE1Q8N0S2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.78■■□□□ 1.4
SYCE1Q8N0S2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.78■■□□□ 1.4
SYCE1Q8N0S2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYCE1Q8N0S2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYCE1Q8N0S2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYCE1Q8N0S2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
SYCE1Q8N0S2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.77■■□□□ 1.4
SYCE1Q8N0S2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.77■■□□□ 1.4
SYCE1Q8N0S2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SYCE1Q8N0S2 ESRRAP2-201ENST00000418437 1549 ntBASIC23.77■■□□□ 1.4
SYCE1Q8N0S2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SYCE1Q8N0S2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.77■■□□□ 1.4
SYCE1Q8N0S2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYCE1Q8N0S2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.77■■□□□ 1.4
SYCE1Q8N0S2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SYCE1Q8N0S2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYCE1Q8N0S2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYCE1Q8N0S2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYCE1Q8N0S2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYCE1Q8N0S2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.76■■□□□ 1.39
SYCE1Q8N0S2 AC120024.1-201ENST00000562672 995 ntBASIC23.76■■□□□ 1.39
SYCE1Q8N0S2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYCE1Q8N0S2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.76■■□□□ 1.39
SYCE1Q8N0S2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SYCE1Q8N0S2 AC127496.7-201ENST00000625110 1798 ntBASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 AC079630.1-202ENST00000618127 1840 ntBASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.75■■□□□ 1.39
SYCE1Q8N0S2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms