Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.32■■□□□ 1.16
CPNE9Q8IYJ1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE9Q8IYJ1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.32■■□□□ 1.16
CPNE9Q8IYJ1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.32■■□□□ 1.16
CPNE9Q8IYJ1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CPNE9Q8IYJ1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 AC009299.2-201ENST00000482477 511 ntBASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CPNE9Q8IYJ1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE9Q8IYJ1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
CPNE9Q8IYJ1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE9Q8IYJ1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE9Q8IYJ1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE9Q8IYJ1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.3■■□□□ 1.16
CPNE9Q8IYJ1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.3■■□□□ 1.16
CPNE9Q8IYJ1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CPNE9Q8IYJ1 CLDN5-201ENST00000403084 2357 ntBASIC22.3■■□□□ 1.16
CPNE9Q8IYJ1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.29■■□□□ 1.16
CPNE9Q8IYJ1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 KRT125P-201ENST00000546827 989 ntBASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 Z92544.1-202ENST00000571933 1220 ntBASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 AC092068.2-201ENST00000590491 1708 ntBASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.28■■□□□ 1.16
CPNE9Q8IYJ1 AC012676.1-201ENST00000574705 1949 ntBASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 AC239859.2-201ENST00000444165 318 ntBASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 C9orf163-202ENST00000624034 2573 ntBASIC22.27■■□□□ 1.16
CPNE9Q8IYJ1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
CPNE9Q8IYJ1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CPNE9Q8IYJ1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 MIR4787-201ENST00000607364 84 ntBASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 AC092028.1-203ENST00000608262 953 ntBASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CPNE9Q8IYJ1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 AC068473.5-201ENST00000616428 2072 ntBASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CPNE9Q8IYJ1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms