Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 RARRES2P2-201ENST00000394842 485 ntBASIC21.67■■□□□ 1.06
PDCD4Q53EL6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 U85056.1-201ENST00000616429 682 ntBASIC21.67■■□□□ 1.06
PDCD4Q53EL6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDCD4Q53EL6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 GUSBP5-202ENST00000510805 1989 ntBASIC21.66■■□□□ 1.06
PDCD4Q53EL6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PDCD4Q53EL6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.65■■□□□ 1.06
PDCD4Q53EL6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.65■■□□□ 1.06
PDCD4Q53EL6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
PDCD4Q53EL6 AC022616.5-201ENST00000518796 181 ntBASIC21.65■■□□□ 1.06
PDCD4Q53EL6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDCD4Q53EL6 AC019171.1-201ENST00000601251 1056 ntBASIC21.65■■□□□ 1.06
PDCD4Q53EL6 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.65■■□□□ 1.06
PDCD4Q53EL6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.65■■□□□ 1.06
PDCD4Q53EL6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDCD4Q53EL6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDCD4Q53EL6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDCD4Q53EL6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDCD4Q53EL6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDCD4Q53EL6 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.64■■□□□ 1.05
PDCD4Q53EL6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.64■■□□□ 1.05
PDCD4Q53EL6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.64■■□□□ 1.05
PDCD4Q53EL6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDCD4Q53EL6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDCD4Q53EL6 LINC00526-201ENST00000581067 1875 ntBASIC21.64■■□□□ 1.05
PDCD4Q53EL6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PDCD4Q53EL6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDCD4Q53EL6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDCD4Q53EL6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDCD4Q53EL6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.63■■□□□ 1.05
PDCD4Q53EL6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDCD4Q53EL6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.63■■□□□ 1.05
PDCD4Q53EL6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDCD4Q53EL6 ECEL1P1-201ENST00000373592 1742 ntBASIC21.63■■□□□ 1.05
PDCD4Q53EL6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.63■■□□□ 1.05
PDCD4Q53EL6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.62■■□□□ 1.05
PDCD4Q53EL6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDCD4Q53EL6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
PDCD4Q53EL6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDCD4Q53EL6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDCD4Q53EL6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PDCD4Q53EL6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDCD4Q53EL6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.62■■□□□ 1.05
PDCD4Q53EL6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDCD4Q53EL6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.62■■□□□ 1.05
PDCD4Q53EL6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 KRT18P60-201ENST00000312876 1297 ntBASIC21.61■■□□□ 1.05
PDCD4Q53EL6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDCD4Q53EL6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDCD4Q53EL6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDCD4Q53EL6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.6■■□□□ 1.05
PDCD4Q53EL6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDCD4Q53EL6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDCD4Q53EL6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.6■■□□□ 1.05
PDCD4Q53EL6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PDCD4Q53EL6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.6■■□□□ 1.05
PDCD4Q53EL6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDCD4Q53EL6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDCD4Q53EL6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDCD4Q53EL6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDCD4Q53EL6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PDCD4Q53EL6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PDCD4Q53EL6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDCD4Q53EL6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDCD4Q53EL6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDCD4Q53EL6 LINC00565-201ENST00000562710 2331 ntBASIC21.58■■□□□ 1.05
PDCD4Q53EL6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDCD4Q53EL6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDCD4Q53EL6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDCD4Q53EL6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDCD4Q53EL6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDCD4Q53EL6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.58■■□□□ 1.05
PDCD4Q53EL6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.58■■□□□ 1.05
PDCD4Q53EL6 AC127496.7-201ENST00000625110 1798 ntBASIC21.58■■□□□ 1.04
PDCD4Q53EL6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms