Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 TMN2YDR107C 2019 nt4.9□□□□□ -1.62
RPA49Q01080 SSB2YNL209W 1842 nt4.9□□□□□ -1.62
RPA49Q01080 AXL2YIL140W 2472 nt4.9□□□□□ -1.62
RPA49Q01080 MBP1YDL056W 2502 nt4.9□□□□□ -1.62
RPA49Q01080 MNT2YGL257C 1677 nt4.9□□□□□ -1.62
RPA49Q01080 MOB2YFL034C-B 864 nt4.9□□□□□ -1.63
RPA49Q01080 YGR066CYGR066C 879 nt4.9□□□□□ -1.63
RPA49Q01080 NMA1YLR328W 1206 nt4.9□□□□□ -1.63
RPA49Q01080 UMP1YBR173C 447 nt4.9□□□□□ -1.63
RPA49Q01080 RSM23YGL129C 1353 nt4.9□□□□□ -1.63
RPA49Q01080 THI22YPR121W 1719 nt4.89□□□□□ -1.63
RPA49Q01080 LDB17YDL146W 1476 nt4.89□□□□□ -1.63
RPA49Q01080 OCA5YHL029C 2040 nt4.89□□□□□ -1.63
RPA49Q01080 ARF2YDL137W 546 nt4.89□□□□□ -1.63
RPA49Q01080 PSR1YLL010C 1284 nt4.89□□□□□ -1.63
RPA49Q01080 YLR036CYLR036C 612 nt4.89□□□□□ -1.63
RPA49Q01080 PRM9YAR031W 897 nt4.89□□□□□ -1.63
RPA49Q01080 SNO1YMR095C 675 nt4.89□□□□□ -1.63
RPA49Q01080 SAP4YGL229C 2457 nt4.89□□□□□ -1.63
RPA49Q01080 EKI1YDR147W 1605 nt4.89□□□□□ -1.63
RPA49Q01080 SAS4YDR181C 1446 nt4.89□□□□□ -1.63
RPA49Q01080 CPR4YCR069W 957 nt4.88□□□□□ -1.63
RPA49Q01080 ERV14YGL054C 417 nt4.88□□□□□ -1.63
RPA49Q01080 DCD1YHR144C 939 nt4.88□□□□□ -1.63
RPA49Q01080 TAF4YMR005W 1167 nt4.88□□□□□ -1.63
RPA49Q01080 GAS2YLR343W 1668 nt4.88□□□□□ -1.63
RPA49Q01080 DAL81YIR023W 2913 nt4.88□□□□□ -1.63
RPA49Q01080 MPH2YDL247W 1830 nt4.88□□□□□ -1.63
RPA49Q01080 RCK2YLR248W 1833 nt4.88□□□□□ -1.63
RPA49Q01080 CYK3YDL117W 2658 nt4.88□□□□□ -1.63
RPA49Q01080 YNL095CYNL095C 1929 nt4.87□□□□□ -1.63
RPA49Q01080 RRB1YMR131C 1536 nt4.87□□□□□ -1.63
RPA49Q01080 YBR139WYBR139W 1527 nt4.87□□□□□ -1.63
RPA49Q01080 MCX1YBR227C 1563 nt4.87□□□□□ -1.63
RPA49Q01080 YGL185CYGL185C 1140 nt4.87□□□□□ -1.63
RPA49Q01080 DSD1YGL196W 1287 nt4.87□□□□□ -1.63
RPA49Q01080 MHO1YJR008W 1017 nt4.87□□□□□ -1.63
RPA49Q01080 RPS31YLR167W 459 nt4.87□□□□□ -1.63
RPA49Q01080 VTA1YLR181C 993 nt4.87□□□□□ -1.63
RPA49Q01080 CCS1YMR038C 750 nt4.87□□□□□ -1.63
RPA49Q01080 YNL134CYNL134C 1131 nt4.87□□□□□ -1.63
RPA49Q01080 RTC1YOL138C 4026 nt4.87□□□□□ -1.63
RPA49Q01080 ALG6YOR002W 1635 nt4.86□□□□□ -1.63
RPA49Q01080 CPS1YJL172W 1731 nt4.86□□□□□ -1.63
RPA49Q01080 RFT1YBL020W 1725 nt4.86□□□□□ -1.63
RPA49Q01080 SAF1YBR280C 1914 nt4.86□□□□□ -1.63
RPA49Q01080 TUP1YCR084C 2142 nt4.86□□□□□ -1.63
RPA49Q01080 PCL9YDL179W 915 nt4.86□□□□□ -1.63
RPA49Q01080 SFK1YKL051W 1062 nt4.86□□□□□ -1.63
RPA49Q01080 DBR1YKL149C 1218 nt4.86□□□□□ -1.63
RPA49Q01080 SOL1YNR034W 966 nt4.86□□□□□ -1.63
RPA49Q01080 CIN5YOR028C 888 nt4.86□□□□□ -1.63
RPA49Q01080 YNG1YOR064C 660 nt4.86□□□□□ -1.63
RPA49Q01080 ARG4YHR018C 1392 nt4.86□□□□□ -1.63
RPA49Q01080 TAF5YBR198C 2397 nt4.86□□□□□ -1.63
RPA49Q01080 KRS1YDR037W 1776 nt4.86□□□□□ -1.63
RPA49Q01080 IMA1YGR287C 1770 nt4.86□□□□□ -1.63
RPA49Q01080 YDL012CYDL012C 324 nt4.85□□□□□ -1.63
RPA49Q01080 SNA2YDR525W-A 240 nt4.85□□□□□ -1.63
RPA49Q01080 SPR6YER115C 576 nt4.85□□□□□ -1.63
RPA49Q01080 YJR085CYJR085C 318 nt4.85□□□□□ -1.63
RPA49Q01080 RCL1YOL010W 1104 nt4.85□□□□□ -1.63
RPA49Q01080 ANT1YPR128C 987 nt4.85□□□□□ -1.63
RPA49Q01080 ESF1YDR365C 1887 nt4.85□□□□□ -1.63
RPA49Q01080 PHO90YJL198W 2646 nt4.85□□□□□ -1.63
RPA49Q01080 EXO1YOR033C 2109 nt4.84□□□□□ -1.63
RPA49Q01080 RAD28YDR030C 1521 nt4.84□□□□□ -1.63
RPA49Q01080 ALD3YMR169C 1521 nt4.84□□□□□ -1.63
RPA49Q01080 ALD2YMR170C 1521 nt4.84□□□□□ -1.63
RPA49Q01080 NOP58YOR310C 1536 nt4.84□□□□□ -1.63
RPA49Q01080 UBC1YDR177W 648 nt4.84□□□□□ -1.63
RPA49Q01080 GRX4YER174C 735 nt4.84□□□□□ -1.63
RPA49Q01080 YGR273CYGR273C 525 nt4.84□□□□□ -1.63
RPA49Q01080 MFA2YNL145W 117 nt4.84□□□□□ -1.63
RPA49Q01080 URE2YNL229C 1065 nt4.84□□□□□ -1.63
RPA49Q01080 MDY2YOL111C 639 nt4.84□□□□□ -1.63
RPA49Q01080 AIM41YOR215C 558 nt4.84□□□□□ -1.63
RPA49Q01080 ECM23YPL021W 564 nt4.84□□□□□ -1.63
RPA49Q01080 OAZ1YPL052W 879 nt4.84□□□□□ -1.63
RPA49Q01080 YDR444WYDR444W 2064 nt4.84□□□□□ -1.64
RPA49Q01080 HST1YOL068C 1512 nt4.83□□□□□ -1.64
RPA49Q01080 TSL1YML100W 3297 nt4.83□□□□□ -1.64
RPA49Q01080 MPC54YOR177C 1395 nt4.83□□□□□ -1.64
RPA49Q01080 KCC4YCL024W 3114 nt4.83□□□□□ -1.64
RPA49Q01080 ARG82YDR173C 1068 nt4.83□□□□□ -1.64
RPA49Q01080 COA3YJL062W-A 258 nt4.83□□□□□ -1.64
RPA49Q01080 MRT4YKL009W 711 nt4.83□□□□□ -1.64
RPA49Q01080 RGS2YOR107W 930 nt4.83□□□□□ -1.64
RPA49Q01080 NAT3YPR131C 588 nt4.83□□□□□ -1.64
RPA49Q01080 CKS1YBR135W 453 nt4.83□□□□□ -1.64
RPA49Q01080 YBR196C-BYBR196C-B 105 nt4.83□□□□□ -1.64
RPA49Q01080 BDP1YNL039W 1785 nt4.83□□□□□ -1.64
RPA49Q01080 MIF2YKL089W 1650 nt4.83□□□□□ -1.64
RPA49Q01080 SEC39YLR440C 2130 nt4.82□□□□□ -1.64
RPA49Q01080 AKL1YBR059C 3327 nt4.82□□□□□ -1.64
RPA49Q01080 ERG4YGL012W 1422 nt4.82□□□□□ -1.64
RPA49Q01080 ISR1YPR106W 1332 nt4.82□□□□□ -1.64
RPA49Q01080 snR57snR57 88 nt4.82□□□□□ -1.64
RPA49Q01080 MRPL7YDR237W 879 nt4.82□□□□□ -1.64
RPA49Q01080 CAF16YFL028C 870 nt4.82□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms