Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CCL20P78556 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL20P78556 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.81■□□□□ 0.44
CCL20P78556 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCL20P78556 AC139530.1-201ENST00000575312 1977 ntBASIC17.8■□□□□ 0.44
CCL20P78556 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL20P78556 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCL20P78556 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL20P78556 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CCL20P78556 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.8■□□□□ 0.44
CCL20P78556 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL20P78556 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL20P78556 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.8■□□□□ 0.44
CCL20P78556 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.8■□□□□ 0.44
CCL20P78556 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL20P78556 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL20P78556 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCL20P78556 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL20P78556 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL20P78556 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL20P78556 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CCL20P78556 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL20P78556 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL20P78556 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.79■□□□□ 0.44
CCL20P78556 AC092053.2-201ENST00000640557 1818 ntBASIC17.79■□□□□ 0.44
CCL20P78556 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCL20P78556 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL20P78556 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL20P78556 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCL20P78556 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.78■□□□□ 0.44
CCL20P78556 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCL20P78556 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL20P78556 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL20P78556 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.78■□□□□ 0.44
CCL20P78556 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL20P78556 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCL20P78556 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CCL20P78556 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCL20P78556 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL20P78556 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL20P78556 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.77■□□□□ 0.44
CCL20P78556 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.77■□□□□ 0.44
CCL20P78556 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL20P78556 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL20P78556 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL20P78556 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCL20P78556 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL20P78556 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCL20P78556 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.77■□□□□ 0.44
CCL20P78556 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CCL20P78556 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCL20P78556 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCL20P78556 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CCL20P78556 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCL20P78556 AC087741.3-201ENST00000624270 1347 ntBASIC17.76■□□□□ 0.43
CCL20P78556 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCL20P78556 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCL20P78556 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCL20P78556 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.76■□□□□ 0.43
CCL20P78556 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCL20P78556 AC092667.1-201ENST00000434301 2586 ntBASIC17.76■□□□□ 0.43
CCL20P78556 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL20P78556 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCL20P78556 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL20P78556 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCL20P78556 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL20P78556 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL20P78556 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL20P78556 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCL20P78556 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL20P78556 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL20P78556 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL20P78556 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.75■□□□□ 0.43
CCL20P78556 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL20P78556 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL20P78556 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL20P78556 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL20P78556 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL20P78556 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCL20P78556 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 HLA-V-202ENST00000446817 847 ntBASIC17.74■□□□□ 0.43
CCL20P78556 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.74■□□□□ 0.43
CCL20P78556 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL20P78556 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCL20P78556 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL20P78556 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL20P78556 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL20P78556 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL20P78556 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.73■□□□□ 0.43
CCL20P78556 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms