Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC092437.1-201ENST00000624794 1048 ntBASIC21.58■■□□□ 1.05
GABREP78334 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
GABREP78334 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.58■■□□□ 1.04
GABREP78334 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
GABREP78334 SLC6A10P-202ENST00000431994 2058 ntBASIC21.57■■□□□ 1.04
GABREP78334 AC145676.1-201ENST00000514988 2004 ntBASIC21.57■■□□□ 1.04
GABREP78334 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GABREP78334 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GABREP78334 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.57■■□□□ 1.04
GABREP78334 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.57■■□□□ 1.04
GABREP78334 AC092803.2-201ENST00000564287 1899 ntBASIC21.57■■□□□ 1.04
GABREP78334 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
GABREP78334 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
GABREP78334 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
GABREP78334 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
GABREP78334 AL358852.1-201ENST00000623174 1268 ntBASIC21.56■■□□□ 1.04
GABREP78334 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
GABREP78334 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.55■■□□□ 1.04
GABREP78334 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GABREP78334 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GABREP78334 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GABREP78334 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GABREP78334 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GABREP78334 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.55■■□□□ 1.04
GABREP78334 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.55■■□□□ 1.04
GABREP78334 AC004911.1-201ENST00000416316 871 ntBASIC21.55■■□□□ 1.04
GABREP78334 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.55■■□□□ 1.04
GABREP78334 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.55■■□□□ 1.04
GABREP78334 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GABREP78334 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.55■■□□□ 1.04
GABREP78334 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
GABREP78334 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
GABREP78334 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GABREP78334 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
GABREP78334 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GABREP78334 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
GABREP78334 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
GABREP78334 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
GABREP78334 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GABREP78334 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GABREP78334 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GABREP78334 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
GABREP78334 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.54■■□□□ 1.04
GABREP78334 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GABREP78334 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.54■■□□□ 1.04
GABREP78334 AC027612.3-201ENST00000413684 1047 ntBASIC21.54■■□□□ 1.04
GABREP78334 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.54■■□□□ 1.04
GABREP78334 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
GABREP78334 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.54■■□□□ 1.04
GABREP78334 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GABREP78334 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GABREP78334 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
GABREP78334 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
GABREP78334 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.54■■□□□ 1.04
GABREP78334 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.53■■□□□ 1.04
GABREP78334 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABREP78334 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABREP78334 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABREP78334 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GABREP78334 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABREP78334 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GABREP78334 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.53■■□□□ 1.04
GABREP78334 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GABREP78334 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
GABREP78334 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
GABREP78334 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.52■■□□□ 1.04
GABREP78334 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.52■■□□□ 1.04
GABREP78334 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GABREP78334 AC123595.1-201ENST00000440769 1046 ntBASIC21.52■■□□□ 1.04
GABREP78334 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.52■■□□□ 1.04
GABREP78334 MIR6084-201ENST00000622012 110 ntBASIC21.52■■□□□ 1.04
GABREP78334 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
GABREP78334 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
GABREP78334 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GABREP78334 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.51■■□□□ 1.03
GABREP78334 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GABREP78334 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GABREP78334 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
GABREP78334 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.51■■□□□ 1.03
GABREP78334 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.51■■□□□ 1.03
GABREP78334 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GABREP78334 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.51■■□□□ 1.03
GABREP78334 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
GABREP78334 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.51■■□□□ 1.03
GABREP78334 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GABREP78334 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
GABREP78334 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.51■■□□□ 1.03
GABREP78334 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.5■■□□□ 1.03
GABREP78334 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.5■■□□□ 1.03
GABREP78334 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GABREP78334 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.5■■□□□ 1.03
GABREP78334 IGHV3-19-201ENST00000521488 291 ntBASIC21.5■■□□□ 1.03
GABREP78334 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.5■■□□□ 1.03
GABREP78334 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.5■■□□□ 1.03
GABREP78334 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
GABREP78334 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.5■■□□□ 1.03
GABREP78334 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.49■■□□□ 1.03
GABREP78334 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GABREP78334 ID1-201ENST00000376105 1233 ntBASIC21.49■■□□□ 1.03
GABREP78334 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms