Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SIRPAP78324 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIRPAP78324 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIRPAP78324 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIRPAP78324 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.51■□□□□ 0.87
SIRPAP78324 AL356740.2-201ENST00000601559 647 ntBASIC20.51■□□□□ 0.87
SIRPAP78324 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIRPAP78324 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
SIRPAP78324 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIRPAP78324 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.51■□□□□ 0.87
SIRPAP78324 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIRPAP78324 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SIRPAP78324 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIRPAP78324 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPAP78324 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPAP78324 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPAP78324 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.5■□□□□ 0.87
SIRPAP78324 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPAP78324 AC079834.2-201ENST00000609776 1949 ntBASIC20.5■□□□□ 0.87
SIRPAP78324 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.5■□□□□ 0.87
SIRPAP78324 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.5■□□□□ 0.87
SIRPAP78324 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPAP78324 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPAP78324 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIRPAP78324 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPAP78324 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPAP78324 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPAP78324 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPAP78324 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.49■□□□□ 0.87
SIRPAP78324 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.49■□□□□ 0.87
SIRPAP78324 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPAP78324 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPAP78324 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.49■□□□□ 0.87
SIRPAP78324 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.49■□□□□ 0.87
SIRPAP78324 AC131281.2-201ENST00000520478 145 ntBASIC20.49■□□□□ 0.87
SIRPAP78324 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.49■□□□□ 0.87
SIRPAP78324 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.49■□□□□ 0.87
SIRPAP78324 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.49■□□□□ 0.87
SIRPAP78324 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.49■□□□□ 0.87
SIRPAP78324 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIRPAP78324 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPAP78324 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPAP78324 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPAP78324 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.48■□□□□ 0.87
SIRPAP78324 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SIRPAP78324 MIR3621-201ENST00000580529 85 ntBASIC20.48■□□□□ 0.87
SIRPAP78324 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.48■□□□□ 0.87
SIRPAP78324 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPAP78324 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPAP78324 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPAP78324 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPAP78324 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPAP78324 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIRPAP78324 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.47■□□□□ 0.87
SIRPAP78324 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SIRPAP78324 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIRPAP78324 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIRPAP78324 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIRPAP78324 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIRPAP78324 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.47■□□□□ 0.87
SIRPAP78324 AC004448.1-201ENST00000458332 883 ntBASIC20.47■□□□□ 0.87
SIRPAP78324 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.47■□□□□ 0.87
SIRPAP78324 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.47■□□□□ 0.87
SIRPAP78324 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SIRPAP78324 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SIRPAP78324 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.46■□□□□ 0.87
SIRPAP78324 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SIRPAP78324 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIRPAP78324 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIRPAP78324 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.46■□□□□ 0.87
SIRPAP78324 MIR6722-201ENST00000617286 78 ntBASIC20.46■□□□□ 0.87
SIRPAP78324 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIRPAP78324 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIRPAP78324 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIRPAP78324 C9orf163-202ENST00000624034 2573 ntBASIC20.46■□□□□ 0.87
SIRPAP78324 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.46■□□□□ 0.87
SIRPAP78324 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SIRPAP78324 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIRPAP78324 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
SIRPAP78324 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.46■□□□□ 0.87
SIRPAP78324 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SIRPAP78324 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SIRPAP78324 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SIRPAP78324 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SIRPAP78324 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIRPAP78324 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SIRPAP78324 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIRPAP78324 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SIRPAP78324 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.45■□□□□ 0.86
SIRPAP78324 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.45■□□□□ 0.86
SIRPAP78324 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.45■□□□□ 0.86
SIRPAP78324 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SIRPAP78324 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.45■□□□□ 0.86
SIRPAP78324 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.45■□□□□ 0.86
SIRPAP78324 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SIRPAP78324 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.45■□□□□ 0.86
SIRPAP78324 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SIRPAP78324 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SIRPAP78324 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.44■□□□□ 0.86
SIRPAP78324 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms