Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.38■□□□□ 0.69
RPS27AP62979 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS27AP62979 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS27AP62979 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS27AP62979 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS27AP62979 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS27AP62979 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RPS27AP62979 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS27AP62979 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.38■□□□□ 0.69
RPS27AP62979 DUX4L9-201ENST00000449051 1259 ntBASIC19.38■□□□□ 0.69
RPS27AP62979 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.38■□□□□ 0.69
RPS27AP62979 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS27AP62979 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
RPS27AP62979 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS27AP62979 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
RPS27AP62979 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.38■□□□□ 0.69
RPS27AP62979 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS27AP62979 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS27AP62979 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS27AP62979 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.37■□□□□ 0.69
RPS27AP62979 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.37■□□□□ 0.69
RPS27AP62979 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RPS27AP62979 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS27AP62979 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPS27AP62979 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RPS27AP62979 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.37■□□□□ 0.69
RPS27AP62979 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPS27AP62979 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.37■□□□□ 0.69
RPS27AP62979 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPS27AP62979 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS27AP62979 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS27AP62979 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS27AP62979 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS27AP62979 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RPS27AP62979 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS27AP62979 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS27AP62979 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS27AP62979 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RPS27AP62979 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS27AP62979 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RPS27AP62979 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS27AP62979 LONRF2P2-201ENST00000439212 571 ntBASIC19.35■□□□□ 0.69
RPS27AP62979 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS27AP62979 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPS27AP62979 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
RPS27AP62979 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPS27AP62979 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
RPS27AP62979 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS27AP62979 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.34■□□□□ 0.69
RPS27AP62979 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPS27AP62979 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS27AP62979 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.34■□□□□ 0.69
RPS27AP62979 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS27AP62979 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS27AP62979 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS27AP62979 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RPS27AP62979 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.34■□□□□ 0.69
RPS27AP62979 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPS27AP62979 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RPS27AP62979 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
RPS27AP62979 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPS27AP62979 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPS27AP62979 AC137767.1-201ENST00000602918 1920 ntBASIC19.33■□□□□ 0.69
RPS27AP62979 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPS27AP62979 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPS27AP62979 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
RPS27AP62979 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
RPS27AP62979 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RPS27AP62979 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS27AP62979 AC011551.1-201ENST00000614101 683 ntBASIC19.33■□□□□ 0.68
RPS27AP62979 C1orf229-201ENST00000623686 2258 ntBASIC19.33■□□□□ 0.68
RPS27AP62979 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS27AP62979 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RPS27AP62979 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.33■□□□□ 0.68
RPS27AP62979 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.33■□□□□ 0.68
RPS27AP62979 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS27AP62979 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RPS27AP62979 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS27AP62979 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RPS27AP62979 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RPS27AP62979 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS27AP62979 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.32■□□□□ 0.68
RPS27AP62979 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.32■□□□□ 0.68
RPS27AP62979 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS27AP62979 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS27AP62979 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPS27AP62979 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.32■□□□□ 0.68
RPS27AP62979 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
RPS27AP62979 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.31■□□□□ 0.68
RPS27AP62979 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.31■□□□□ 0.68
RPS27AP62979 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.31■□□□□ 0.68
RPS27AP62979 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.31■□□□□ 0.68
RPS27AP62979 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms