Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PDE1AP54750 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
PDE1AP54750 ME2-208ENST00000638937 2471 ntTSL 5 BASIC27.72■■■□□ 2.03
PDE1AP54750 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.71■■■□□ 2.03
PDE1AP54750 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC27.71■■■□□ 2.03
PDE1AP54750 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PDE1AP54750 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.71■■■□□ 2.03
PDE1AP54750 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.71■■■□□ 2.03
PDE1AP54750 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.71■■■□□ 2.03
PDE1AP54750 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
PDE1AP54750 AL035685.1-201ENST00000636663 812 ntBASIC27.71■■■□□ 2.03
PDE1AP54750 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
PDE1AP54750 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.71■■■□□ 2.03
PDE1AP54750 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
PDE1AP54750 C9orf163-202ENST00000624034 2573 ntBASIC27.7■■■□□ 2.03
PDE1AP54750 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PDE1AP54750 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.7■■■□□ 2.02
PDE1AP54750 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.7■■■□□ 2.02
PDE1AP54750 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.7■■■□□ 2.02
PDE1AP54750 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC27.7■■■□□ 2.02
PDE1AP54750 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PDE1AP54750 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
PDE1AP54750 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PDE1AP54750 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.69■■■□□ 2.02
PDE1AP54750 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
PDE1AP54750 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
PDE1AP54750 DUSP8P3-201ENST00000399571 1760 ntBASIC27.69■■■□□ 2.02
PDE1AP54750 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.69■■■□□ 2.02
PDE1AP54750 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.69■■■□□ 2.02
PDE1AP54750 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PDE1AP54750 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
PDE1AP54750 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
PDE1AP54750 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PDE1AP54750 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC27.67■■■□□ 2.02
PDE1AP54750 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDE1AP54750 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDE1AP54750 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDE1AP54750 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDE1AP54750 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC27.67■■■□□ 2.02
PDE1AP54750 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.67■■■□□ 2.02
PDE1AP54750 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.67■■■□□ 2.02
PDE1AP54750 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
PDE1AP54750 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDE1AP54750 AC079630.1-202ENST00000618127 1840 ntBASIC27.67■■■□□ 2.02
PDE1AP54750 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
PDE1AP54750 AC005703.6-201ENST00000623265 1329 ntBASIC27.67■■■□□ 2.02
PDE1AP54750 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PDE1AP54750 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
PDE1AP54750 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
PDE1AP54750 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PDE1AP54750 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC27.66■■■□□ 2.02
PDE1AP54750 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
PDE1AP54750 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PDE1AP54750 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.65■■■□□ 2.02
PDE1AP54750 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.65■■■□□ 2.02
PDE1AP54750 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PDE1AP54750 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
PDE1AP54750 AC068473.5-201ENST00000616428 2072 ntBASIC27.65■■■□□ 2.02
PDE1AP54750 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PDE1AP54750 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.65■■■□□ 2.02
PDE1AP54750 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PDE1AP54750 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PDE1AP54750 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC27.65■■■□□ 2.02
PDE1AP54750 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC27.65■■■□□ 2.02
PDE1AP54750 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PDE1AP54750 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
PDE1AP54750 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PDE1AP54750 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
PDE1AP54750 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PDE1AP54750 TSPY9P-201ENST00000440215 945 ntBASIC27.64■■■□□ 2.02
PDE1AP54750 TSPY11P-201ENST00000442607 1045 ntBASIC27.64■■■□□ 2.02
PDE1AP54750 UNC93B8-201ENST00000511903 705 ntBASIC27.64■■■□□ 2.02
PDE1AP54750 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.64■■■□□ 2.02
PDE1AP54750 MTDHP2-201ENST00000601468 714 ntBASIC27.64■■■□□ 2.02
PDE1AP54750 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PDE1AP54750 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.63■■■□□ 2.01
PDE1AP54750 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
PDE1AP54750 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
PDE1AP54750 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PDE1AP54750 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PDE1AP54750 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PDE1AP54750 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
PDE1AP54750 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
PDE1AP54750 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.63■■■□□ 2.01
PDE1AP54750 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PDE1AP54750 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.62■■■□□ 2.01
PDE1AP54750 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
PDE1AP54750 AC010997.5-201ENST00000609182 354 ntBASIC27.62■■■□□ 2.01
PDE1AP54750 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PDE1AP54750 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
PDE1AP54750 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PDE1AP54750 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PDE1AP54750 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
PDE1AP54750 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
PDE1AP54750 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
PDE1AP54750 AC133561.1-201ENST00000568600 2415 ntBASIC27.61■■■□□ 2.01
PDE1AP54750 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC27.61■■■□□ 2.01
PDE1AP54750 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PDE1AP54750 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PDE1AP54750 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.61■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms