Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 DBF2YGR092W 1719 nt4.58□□□□□ -1.68
YNL040WP53960 APE1YKL103C 1545 nt4.58□□□□□ -1.68
YNL040WP53960 SRG1SRG1 551 nt4.58□□□□□ -1.68
YNL040WP53960 UPS3YDR185C 540 nt4.58□□□□□ -1.68
YNL040WP53960 EAF5YEL018W 840 nt4.58□□□□□ -1.68
YNL040WP53960 RNA15YGL044C 891 nt4.58□□□□□ -1.68
YNL040WP53960 RGS2YOR107W 930 nt4.58□□□□□ -1.68
YNL040WP53960 IMD2YHR216W 1572 nt4.57□□□□□ -1.68
YNL040WP53960 HRK1YOR267C 2280 nt4.57□□□□□ -1.68
YNL040WP53960 KCH1YJR054W 1494 nt4.57□□□□□ -1.68
YNL040WP53960 ICY2YPL250C 411 nt4.57□□□□□ -1.68
YNL040WP53960 GRC3YLL035W 1899 nt4.57□□□□□ -1.68
YNL040WP53960 MOT2YER068W 1764 nt4.57□□□□□ -1.68
YNL040WP53960 YPL260WYPL260W 1656 nt4.57□□□□□ -1.68
YNL040WP53960 FDC1YDR539W 1512 nt4.56□□□□□ -1.68
YNL040WP53960 YTA12YMR089C 2478 nt4.56□□□□□ -1.68
YNL040WP53960 XKS1YGR194C 1803 nt4.56□□□□□ -1.68
YNL040WP53960 YMD8YML038C 1329 nt4.56□□□□□ -1.68
YNL040WP53960 YDR056CYDR056C 618 nt4.56□□□□□ -1.68
YNL040WP53960 RFA2YNL312W 822 nt4.56□□□□□ -1.68
YNL040WP53960 ELC1YPL046C 300 nt4.56□□□□□ -1.68
YNL040WP53960 ATH1YPR026W 3636 nt4.56□□□□□ -1.68
YNL040WP53960 UPC2YDR213W 2742 nt4.56□□□□□ -1.68
YNL040WP53960 YMR221CYMR221C 1515 nt4.56□□□□□ -1.68
YNL040WP53960 BSC5YNR069C 1470 nt4.56□□□□□ -1.68
YNL040WP53960 YCR023CYCR023C 1836 nt4.56□□□□□ -1.68
YNL040WP53960 MSC7YHR039C 1935 nt4.55□□□□□ -1.68
YNL040WP53960 RPL12AYEL054C 498 nt4.55□□□□□ -1.68
YNL040WP53960 ADD37YMR184W 597 nt4.55□□□□□ -1.68
YNL040WP53960 SSH4YKL124W 1740 nt4.55□□□□□ -1.68
YNL040WP53960 CEG1YGL130W 1380 nt4.54□□□□□ -1.68
YNL040WP53960 TOG1YER184C 2385 nt4.54□□□□□ -1.68
YNL040WP53960 snR7-SsnR7-S 179 nt4.54□□□□□ -1.68
YNL040WP53960 YGR139WYGR139W 339 nt4.54□□□□□ -1.68
YNL040WP53960 ACP1YKL192C 378 nt4.54□□□□□ -1.68
YNL040WP53960 REI1YBR267W 1182 nt4.54□□□□□ -1.68
YNL040WP53960 TFG1YGR186W 2208 nt4.54□□□□□ -1.68
YNL040WP53960 MET12YPL023C 1974 nt4.54□□□□□ -1.68
YNL040WP53960 ATR1YML116W 1629 nt4.54□□□□□ -1.68
YNL040WP53960 STE12YHR084W 2067 nt4.53□□□□□ -1.68
YNL040WP53960 SUM1YDR310C 3189 nt4.53□□□□□ -1.68
YNL040WP53960 GAS3YMR215W 1575 nt4.53□□□□□ -1.68
YNL040WP53960 ASP1YDR321W 1146 nt4.53□□□□□ -1.68
YNL040WP53960 YJL218WYJL218W 591 nt4.53□□□□□ -1.68
YNL040WP53960 MED4YOR174W 855 nt4.53□□□□□ -1.68
YNL040WP53960 YPR071WYPR071W 636 nt4.53□□□□□ -1.68
YNL040WP53960 SUA7YPR086W 1038 nt4.53□□□□□ -1.68
YNL040WP53960 GCR2YNL199C 1605 nt4.53□□□□□ -1.68
YNL040WP53960 PRP28YDR243C 1767 nt4.53□□□□□ -1.69
YNL040WP53960 GIP1YBR045C 1920 nt4.52□□□□□ -1.69
YNL040WP53960 RPN6YDL097C 1305 nt4.52□□□□□ -1.69
YNL040WP53960 CDC15YAR019C 2925 nt4.52□□□□□ -1.69
YNL040WP53960 YHL034W-AYHL034W-A 462 nt4.52□□□□□ -1.69
YNL040WP53960 MID2YLR332W 1131 nt4.52□□□□□ -1.69
YNL040WP53960 GPI12YMR281W 915 nt4.52□□□□□ -1.69
YNL040WP53960 MVD1YNR043W 1191 nt4.52□□□□□ -1.69
YNL040WP53960 YPL278CYPL278C 303 nt4.52□□□□□ -1.69
YNL040WP53960 FAR10YLR238W 1437 nt4.52□□□□□ -1.69
YNL040WP53960 GSY1YFR015C 2127 nt4.52□□□□□ -1.69
YNL040WP53960 DPH6YLR143W 2058 nt4.52□□□□□ -1.69
YNL040WP53960 CLB4YLR210W 1383 nt4.52□□□□□ -1.69
YNL040WP53960 FRE7YOL152W 1863 nt4.52□□□□□ -1.69
YNL040WP53960 RPG1YBR079C 2895 nt4.51□□□□□ -1.69
YNL040WP53960 RPS16BYDL083C 432 nt4.51□□□□□ -1.69
YNL040WP53960 SKI6YGR195W 741 nt4.51□□□□□ -1.69
YNL040WP53960 RFC2YJR068W 1062 nt4.51□□□□□ -1.69
YNL040WP53960 DBR1YKL149C 1218 nt4.51□□□□□ -1.69
YNL040WP53960 NTR2YKR022C 969 nt4.51□□□□□ -1.69
YNL040WP53960 YAR023CYAR023C 540 nt4.51□□□□□ -1.69
YNL040WP53960 YOL153CYOL153C 1746 nt4.51□□□□□ -1.69
YNL040WP53960 TRM44YPL030W 1704 nt4.51□□□□□ -1.69
YNL040WP53960 ESF1YDR365C 1887 nt4.51□□□□□ -1.69
YNL040WP53960 HMLALPHA1YCL066W 528 nt4.5□□□□□ -1.69
YNL040WP53960 MATALPHA1YCR040W 528 nt4.5□□□□□ -1.69
YNL040WP53960 BUD13YGL174W 801 nt4.5□□□□□ -1.69
YNL040WP53960 ISA1YLL027W 753 nt4.5□□□□□ -1.69
YNL040WP53960 YAR030CYAR030C 342 nt4.5□□□□□ -1.69
YNL040WP53960 YLR364C-AYLR364C-A 123 nt4.5□□□□□ -1.69
YNL040WP53960 MTF1YMR228W 1026 nt4.5□□□□□ -1.69
YNL040WP53960 YNL057WYNL057W 333 nt4.5□□□□□ -1.69
YNL040WP53960 YIL001WYIL001W 1542 nt4.5□□□□□ -1.69
YNL040WP53960 APC1YNL172W 5247 nt4.49□□□□□ -1.69
YNL040WP53960 LCB2YDR062W 1686 nt4.49□□□□□ -1.69
YNL040WP53960 NUP42YDR192C 1293 nt4.49□□□□□ -1.69
YNL040WP53960 SUR2YDR297W 1050 nt4.49□□□□□ -1.69
YNL040WP53960 YGR016WYGR016W 573 nt4.49□□□□□ -1.69
YNL040WP53960 ISY1YJR050W 708 nt4.49□□□□□ -1.69
YNL040WP53960 LYP1YNL268W 1836 nt4.49□□□□□ -1.69
YNL040WP53960 APL6YGR261C 2430 nt4.48□□□□□ -1.69
YNL040WP53960 MEC3YLR288C 1425 nt4.48□□□□□ -1.69
YNL040WP53960 GIP2YER054C 1647 nt4.48□□□□□ -1.69
YNL040WP53960 OCA4YCR095C 1089 nt4.48□□□□□ -1.69
YNL040WP53960 snR7-LsnR7-L 214 nt4.48□□□□□ -1.69
YNL040WP53960 RSM10YDR041W 612 nt4.48□□□□□ -1.69
YNL040WP53960 LOH1YJL038C 660 nt4.48□□□□□ -1.69
YNL040WP53960 YNK1YKL067W 462 nt4.48□□□□□ -1.69
YNL040WP53960 PEP4YPL154C 1218 nt4.48□□□□□ -1.69
YNL040WP53960 CDC48YDL126C 2508 nt4.48□□□□□ -1.69
YNL040WP53960 PIM1YBL022C 3402 nt4.47□□□□□ -1.69
YNL040WP53960 JHD2YJR119C 2187 nt4.47□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 21.9 ms