Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 PFK2YMR205C 2880 nt5.71□□□□□ -1.5 RIP-Chip
PUB1P32588 YEH1YLL012W 1722 nt5.71□□□□□ -1.5
PUB1P32588 YJR071WYJR071W 369 nt5.7□□□□□ -1.5
PUB1P32588 STE18YJR086W 333 nt5.7□□□□□ -1.5 RIP-Chip
PUB1P32588 YOR114WYOR114W 885 nt5.7□□□□□ -1.5
PUB1P32588 LSC1YOR142W 990 nt5.7□□□□□ -1.5
PUB1P32588 YBR103C-AYBR103C-A 144 nt5.7□□□□□ -1.5
PUB1P32588 CST9YLR394W 1449 nt5.7□□□□□ -1.5
PUB1P32588 CCT8YJL008C 1707 nt5.7□□□□□ -1.5
PUB1P32588 DEG1YFL001W 1329 nt5.7□□□□□ -1.5
PUB1P32588 FKH1YIL131C 1455 nt5.7□□□□□ -1.5
PUB1P32588 TYR1YBR166C 1359 nt5.69□□□□□ -1.5
PUB1P32588 TOS2YGR221C 1869 nt5.69□□□□□ -1.5
PUB1P32588 SLC1YDL052C 912 nt5.69□□□□□ -1.5
PUB1P32588 VCX1YDL128W 1236 nt5.69□□□□□ -1.5 RIP-Chip
PUB1P32588 TAF10YDR167W 621 nt5.69□□□□□ -1.5
PUB1P32588 DON1YDR273W 1098 nt5.69□□□□□ -1.5
PUB1P32588 PRS2YER099C 957 nt5.69□□□□□ -1.5
PUB1P32588 LCL3YGL085W 825 nt5.69□□□□□ -1.5 RIP-Chip
PUB1P32588 PRS3YHL011C 963 nt5.69□□□□□ -1.5 RIP-Chip
PUB1P32588 YIL029W-AYIL029W-A 372 nt5.69□□□□□ -1.5
PUB1P32588 YJL218WYJL218W 591 nt5.69□□□□□ -1.5
PUB1P32588 MDH1YKL085W 1005 nt5.69□□□□□ -1.5 RIP-Chip
PUB1P32588 ICT1YLR099C 1185 nt5.69□□□□□ -1.5
PUB1P32588 ICS2YBR157C 768 nt5.69□□□□□ -1.5
PUB1P32588 BSD2YBR290W 966 nt5.69□□□□□ -1.5
PUB1P32588 SAG1YJR004C 1953 nt5.69□□□□□ -1.5
PUB1P32588 LAG2YOL025W 1983 nt5.69□□□□□ -1.5 RIP-Chip
PUB1P32588 UIP5YKR044W 1332 nt5.69□□□□□ -1.5
PUB1P32588 CRF1YDR223W 1404 nt5.68□□□□□ -1.5
PUB1P32588 MRP4YHL004W 1185 nt5.68□□□□□ -1.5 RIP-Chip
PUB1P32588 GSP1YLR293C 660 nt5.68□□□□□ -1.5
PUB1P32588 YOR225WYOR225W 330 nt5.68□□□□□ -1.5
PUB1P32588 YPR078CYPR078C 1119 nt5.68□□□□□ -1.5
PUB1P32588 MRP2YPR166C 348 nt5.68□□□□□ -1.5
PUB1P32588 ILV6YCL009C 930 nt5.68□□□□□ -1.5
PUB1P32588 YDR210W-AYDR210W-A 1317 nt5.68□□□□□ -1.5
PUB1P32588 DUN1YDL101C 1542 nt5.68□□□□□ -1.5
PUB1P32588 HXT7YDR342C 1713 nt5.68□□□□□ -1.5 RIP-Chip
PUB1P32588 HXT6YDR343C 1713 nt5.68□□□□□ -1.5 RIP-Chip
PUB1P32588 POX1YGL205W 2247 nt5.67□□□□□ -1.5
PUB1P32588 PRR2YDL214C 2100 nt5.67□□□□□ -1.5
PUB1P32588 YGL082WYGL082W 1146 nt5.67□□□□□ -1.5 RIP-Chip
PUB1P32588 HTD2YHR067W 843 nt5.67□□□□□ -1.5
PUB1P32588 YHR137C-AYHR137C-A 651 nt5.67□□□□□ -1.5
PUB1P32588 YHR218W-AYHR218W-A 318 nt5.67□□□□□ -1.5
PUB1P32588 ARC15YIL062C 465 nt5.67□□□□□ -1.5
PUB1P32588 YIR042CYIR042C 711 nt5.67□□□□□ -1.5
PUB1P32588 RFC2YJR068W 1062 nt5.67□□□□□ -1.5
PUB1P32588 RLP24YLR009W 600 nt5.67□□□□□ -1.5
PUB1P32588 QRI5YLR204W 336 nt5.67□□□□□ -1.5 RIP-Chip
PUB1P32588 SWM2YNR004W 441 nt5.67□□□□□ -1.5 RIP-Chip
PUB1P32588 YBL112CYBL112C 318 nt5.67□□□□□ -1.5
PUB1P32588 SGT1YOR057W 1188 nt5.67□□□□□ -1.5
PUB1P32588 ARF3YOR094W 552 nt5.67□□□□□ -1.5 RIP-Chip
PUB1P32588 OXR1YPL196W 822 nt5.67□□□□□ -1.5
PUB1P32588 MUP3YHL036W 1641 nt5.66□□□□□ -1.5 RIP-Chip
PUB1P32588 HSM3YBR272C 1443 nt5.66□□□□□ -1.5
PUB1P32588 CLB3YDL155W 1284 nt5.66□□□□□ -1.5
PUB1P32588 CTH1YDR151C 978 nt5.66□□□□□ -1.5 RIP-Chip
PUB1P32588 MTD1YKR080W 963 nt5.66□□□□□ -1.5
PUB1P32588 BOS1YLR078C 735 nt5.66□□□□□ -1.5
PUB1P32588 SFH1YLR321C 1281 nt5.66□□□□□ -1.5
PUB1P32588 TAF9YMR236W 474 nt5.66□□□□□ -1.5
PUB1P32588 MRPL22YNL177C 930 nt5.66□□□□□ -1.5
PUB1P32588 MUM2YBR057C 1101 nt5.66□□□□□ -1.5
PUB1P32588 BBP1YPL255W 1158 nt5.66□□□□□ -1.5
PUB1P32588 VID24YBR105C 1089 nt5.66□□□□□ -1.5 RIP-Chip
PUB1P32588 RBS1YDL189W 1374 nt5.66□□□□□ -1.5
PUB1P32588 TFG1YGR186W 2208 nt5.66□□□□□ -1.5
PUB1P32588 YIL055CYIL055C 1884 nt5.65□□□□□ -1.5
PUB1P32588 YHL017WYHL017W 1599 nt5.65□□□□□ -1.5 RIP-Chip
PUB1P32588 UBP13YBL067C 2244 nt5.65□□□□□ -1.5
PUB1P32588 MXR1YER042W 555 nt5.65□□□□□ -1.5
PUB1P32588 RPL22BYFL034C-A 369 nt5.65□□□□□ -1.5
PUB1P32588 YGL159WYGL159W 1113 nt5.65□□□□□ -1.5
PUB1P32588 SCM4YGR049W 564 nt5.65□□□□□ -1.5
PUB1P32588 YGR122WYGR122W 1209 nt5.65□□□□□ -1.5 RIP-Chip
PUB1P32588 YGR290WYGR290W 444 nt5.65□□□□□ -1.5
PUB1P32588 COX6YHR051W 447 nt5.65□□□□□ -1.5 RIP-Chip
PUB1P32588 DAN1YJR150C 897 nt5.65□□□□□ -1.5
PUB1P32588 GTO3YMR251W 1101 nt5.65□□□□□ -1.5
PUB1P32588 SNO4YMR322C 714 nt5.65□□□□□ -1.5
PUB1P32588 YNL324WYNL324W 396 nt5.65□□□□□ -1.5
PUB1P32588 COS1YNL336W 1146 nt5.65□□□□□ -1.5 RIP-Chip
PUB1P32588 HSP33YOR391C 714 nt5.65□□□□□ -1.5
PUB1P32588 HSP32YPL280W 714 nt5.65□□□□□ -1.5
PUB1P32588 YPR123CYPR123C 435 nt5.65□□□□□ -1.5
PUB1P32588 RPT2YDL007W 1314 nt5.65□□□□□ -1.51
PUB1P32588 VPS30YPL120W 1674 nt5.65□□□□□ -1.51
PUB1P32588 TFC6YDR362C 2019 nt5.64□□□□□ -1.51
PUB1P32588 IMG1YCR046C 510 nt5.64□□□□□ -1.51 RIP-Chip
PUB1P32588 UGX2YDL169C 672 nt5.64□□□□□ -1.51
PUB1P32588 ARG82YDR173C 1068 nt5.64□□□□□ -1.51
PUB1P32588 YDR320W-BYDR320W-B 138 nt5.64□□□□□ -1.51
PUB1P32588 TMT1YER175C 900 nt5.64□□□□□ -1.51
PUB1P32588 NPY1YGL067W 1155 nt5.64□□□□□ -1.51 RIP-Chip
PUB1P32588 RPL24BYGR148C 468 nt5.64□□□□□ -1.51
PUB1P32588 YJL007CYJL007C 315 nt5.64□□□□□ -1.51
PUB1P32588 MTW1YAL034W-A 870 nt5.64□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 31.9 ms