Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.17■■■□□ 2.1
COL11A2P13942 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL11A2P13942 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.16■■■□□ 2.1
COL11A2P13942 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL11A2P13942 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
COL11A2P13942 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.16■■■□□ 2.1
COL11A2P13942 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC28.16■■■□□ 2.1
COL11A2P13942 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
COL11A2P13942 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
COL11A2P13942 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
COL11A2P13942 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC28.15■■■□□ 2.1
COL11A2P13942 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC28.15■■■□□ 2.1
COL11A2P13942 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.15■■■□□ 2.1
COL11A2P13942 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
COL11A2P13942 AL354811.1-201ENST00000610286 706 ntBASIC28.15■■■□□ 2.1
COL11A2P13942 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
COL11A2P13942 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
COL11A2P13942 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.15■■■□□ 2.1
COL11A2P13942 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
COL11A2P13942 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL11A2P13942 AC010525.1-201ENST00000585559 441 ntBASIC28.15■■■□□ 2.1
COL11A2P13942 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
COL11A2P13942 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
COL11A2P13942 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC28.14■■■□□ 2.1
COL11A2P13942 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
COL11A2P13942 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
COL11A2P13942 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.14■■■□□ 2.1
COL11A2P13942 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC28.14■■■□□ 2.1
COL11A2P13942 KRT18P61-201ENST00000585825 1298 ntBASIC28.14■■■□□ 2.1
COL11A2P13942 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
COL11A2P13942 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.14■■■□□ 2.09
COL11A2P13942 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
COL11A2P13942 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
COL11A2P13942 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
COL11A2P13942 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.13■■■□□ 2.09
COL11A2P13942 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.13■■■□□ 2.09
COL11A2P13942 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.13■■■□□ 2.09
COL11A2P13942 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.13■■■□□ 2.09
COL11A2P13942 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.12■■■□□ 2.09
COL11A2P13942 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.12■■■□□ 2.09
COL11A2P13942 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.12■■■□□ 2.09
COL11A2P13942 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
COL11A2P13942 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.12■■■□□ 2.09
COL11A2P13942 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.12■■■□□ 2.09
COL11A2P13942 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
COL11A2P13942 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.11■■■□□ 2.09
COL11A2P13942 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.11■■■□□ 2.09
COL11A2P13942 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
COL11A2P13942 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
COL11A2P13942 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC28.1■■■□□ 2.09
COL11A2P13942 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.1■■■□□ 2.09
COL11A2P13942 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.1■■■□□ 2.09
COL11A2P13942 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
COL11A2P13942 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.1■■■□□ 2.09
COL11A2P13942 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL11A2P13942 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.1■■■□□ 2.09
COL11A2P13942 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
COL11A2P13942 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.09■■■□□ 2.09
COL11A2P13942 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC28.09■■■□□ 2.09
COL11A2P13942 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
COL11A2P13942 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.09■■■□□ 2.09
COL11A2P13942 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
COL11A2P13942 HLA-L-209ENST00000420110 1011 ntBASIC28.08■■■□□ 2.09
COL11A2P13942 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC28.08■■■□□ 2.09
COL11A2P13942 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
COL11A2P13942 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
COL11A2P13942 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
COL11A2P13942 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
COL11A2P13942 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC28.06■■■□□ 2.08
COL11A2P13942 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.06■■■□□ 2.08
COL11A2P13942 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
COL11A2P13942 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.06■■■□□ 2.08
COL11A2P13942 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
COL11A2P13942 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
COL11A2P13942 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
COL11A2P13942 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
COL11A2P13942 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
COL11A2P13942 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
COL11A2P13942 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.05■■■□□ 2.08
COL11A2P13942 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
COL11A2P13942 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL11A2P13942 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL11A2P13942 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC28.05■■■□□ 2.08
COL11A2P13942 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL11A2P13942 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
COL11A2P13942 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.05■■■□□ 2.08
COL11A2P13942 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
COL11A2P13942 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
COL11A2P13942 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC28.04■■■□□ 2.08
COL11A2P13942 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COL11A2P13942 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COL11A2P13942 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.03■■■□□ 2.08
COL11A2P13942 AC141586.4-201ENST00000624558 1573 ntBASIC28.03■■■□□ 2.08
COL11A2P13942 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
COL11A2P13942 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
COL11A2P13942 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
COL11A2P13942 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
COL11A2P13942 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
COL11A2P13942 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.03■■■□□ 2.08
COL11A2P13942 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms