Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 ASN1YPR145W 1719 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 WTM2YOR229W 1404 nt5.74□□□□□ -1.49
TY1A-ER1P0CX71 IMA3YIL172C 1770 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 IMA4YJL221C 1770 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 PSP2YML017W 1782 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 BDP1YNL039W 1785 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 YDR387CYDR387C 1668 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 CLA4YNL298W 2529 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 NPY1YGL067W 1155 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 GIC1YHR061C 945 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 PCL7YIL050W 858 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 GLG2YJL137C 1143 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 GCN3YKR026C 918 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 MPP6YNR024W 561 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 RPL43AYPR043W 279 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 TMN2YDR107C 2019 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 MDM38YOL027C 1722 nt5.73□□□□□ -1.49
TY1A-ER1P0CX71 YPL247CYPL247C 1572 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 SHM1YBR263W 1473 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 PSA1YDL055C 1086 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 DON1YDR273W 1098 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 SUF5tG(CCC)O 72 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 YGR115CYGR115C 780 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 RPN13YLR421C 471 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 OGG1YML060W 1131 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 CSI2YOL007C 1026 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 NAT3YPR131C 588 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 HEM1YDR232W 1647 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 URK1YNR012W 1506 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 TIM54YJL054W 1437 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 UBP7YIL156W 3216 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 RPN4YDL020C 1596 nt5.72□□□□□ -1.49
TY1A-ER1P0CX71 YDR203WYDR203W 318 nt5.71□□□□□ -1.5
TY1A-ER1P0CX71 SKP1YDR328C 585 nt5.71□□□□□ -1.5
TY1A-ER1P0CX71 SYF2YGR129W 648 nt5.71□□□□□ -1.5
TY1A-ER1P0CX71 FOL2YGR267C 732 nt5.71□□□□□ -1.5
TY1A-ER1P0CX71 YJR157WYJR157W 363 nt5.71□□□□□ -1.5
TY1A-ER1P0CX71 SGT1YOR057W 1188 nt5.71□□□□□ -1.5
TY1A-ER1P0CX71 DSC3YOR223W 879 nt5.71□□□□□ -1.5
TY1A-ER1P0CX71 MTC5YDR128W 3447 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 YIG1YPL201C 1386 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 APE1YKL103C 1545 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 GPI11YDR302W 660 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 YDR391CYDR391C 699 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 TYW3YGL050W 822 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 SCM4YGR049W 564 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 PTI1YGR156W 1278 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 YGR210CYGR210C 1236 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 YIL028WYIL028W 399 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 AUR1YKL004W 1206 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 SWD2YKL018W 990 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 CCW12YLR110C 402 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 SAS2YMR127C 1017 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 YNL108CYNL108C 813 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 YMD8YML038C 1329 nt5.7□□□□□ -1.5
TY1A-ER1P0CX71 YCR001WYCR001W 315 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 COX9YDL067C 180 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 UBC1YDR177W 648 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 YDR415CYDR415C 1125 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 YGL204CYGL204C 306 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 PUS6YGR169C 1215 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 LIN1YHR156C 1023 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 YKR032WYKR032W 315 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 PUP1YOR157C 786 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 YPL108WYPL108W 507 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 YPR078CYPR078C 1119 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 UBX2YML013W 1755 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 MIC60YKR016W 1623 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 GCR2YNL199C 1605 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 GEX2YKR106W 1848 nt5.69□□□□□ -1.5
TY1A-ER1P0CX71 ALT1YLR089C 1779 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 YER156CYER156C 1017 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 OST5YGL226C-A 261 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 RPP1YHR062C 882 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 HIS6YIL020C 786 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 FUS3YBL016W 1062 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 YMR030W-AYMR030W-A 291 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 AIM36YMR157C 768 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 MRPL22YNL177C 930 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 YNR061CYNR061C 660 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 ATG5YPL149W 885 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 YBR219CYBR219C 384 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 SRB6YBR253W 366 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 PAT1YCR077C 2391 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 AFG1YEL052W 1530 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 YDL109CYDL109C 1944 nt5.68□□□□□ -1.5
TY1A-ER1P0CX71 MRC1YCL061C 3291 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 HXT17YNR072W 1695 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 YER085CYER085C 522 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 ISC10YER180C 804 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 CPD1YGR247W 720 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 PRS3YHL011C 963 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 CBR1YIL043C 855 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 MMF1YIL051C 438 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 RPR2YIR015W 435 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 TEF4YKL081W 1239 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 IZH2YOL002C 954 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 YNG1YOR064C 660 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 KTR7YIL085C 1554 nt5.67□□□□□ -1.5
TY1A-ER1P0CX71 HOF1YMR032W 2010 nt5.67□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms