Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 RRP40YOL142W 723 nt4.15□□□□□ -1.75
RPL40BP0CH09 TGS1YPL157W 948 nt4.15□□□□□ -1.75
RPL40BP0CH09 NOP2YNL061W 1857 nt4.15□□□□□ -1.75
RPL40BP0CH09 HRK1YOR267C 2280 nt4.14□□□□□ -1.75
RPL40BP0CH09 tS(AGA)D3tS(AGA)D3 83 nt4.14□□□□□ -1.75
RPL40BP0CH09 GPP1YIL053W 753 nt4.14□□□□□ -1.75
RPL40BP0CH09 RPL43BYJR094W-A 279 nt4.14□□□□□ -1.75
RPL40BP0CH09 MAK3YPR051W 531 nt4.14□□□□□ -1.75
RPL40BP0CH09 PSE1YMR308C 3270 nt4.14□□□□□ -1.75
RPL40BP0CH09 THI20YOL055C 1656 nt4.13□□□□□ -1.75
RPL40BP0CH09 BSC1YDL037C 987 nt4.13□□□□□ -1.75
RPL40BP0CH09 YHL049CYHL049C 816 nt4.13□□□□□ -1.75
RPL40BP0CH09 HOT1YMR172W 2160 nt4.13□□□□□ -1.75
RPL40BP0CH09 FDC1YDR539W 1512 nt4.12□□□□□ -1.75
RPL40BP0CH09 YBL006W-AYBL006W-A 150 nt4.12□□□□□ -1.75
RPL40BP0CH09 GPR1YDL035C 2886 nt4.12□□□□□ -1.75
RPL40BP0CH09 UTP9YHR196W 1728 nt4.12□□□□□ -1.75
RPL40BP0CH09 CPR4YCR069W 957 nt4.11□□□□□ -1.75
RPL40BP0CH09 ARC1YGL105W 1131 nt4.11□□□□□ -1.75
RPL40BP0CH09 NCS6YGL211W 1080 nt4.11□□□□□ -1.75
RPL40BP0CH09 RPS0AYGR214W 759 nt4.11□□□□□ -1.75
RPL40BP0CH09 SDS3YIL084C 984 nt4.11□□□□□ -1.75
RPL40BP0CH09 RAD14YMR201C 1116 nt4.11□□□□□ -1.75
RPL40BP0CH09 PHM7YOL084W 2976 nt4.11□□□□□ -1.75
RPL40BP0CH09 FOB1YDR110W 1701 nt4.11□□□□□ -1.75
RPL40BP0CH09 RVB1YDR190C 1392 nt4.11□□□□□ -1.75
RPL40BP0CH09 SEC18YBR080C 2277 nt4.1□□□□□ -1.75
RPL40BP0CH09 RAD16YBR114W 2373 nt4.1□□□□□ -1.75
RPL40BP0CH09 YCR006CYCR006C 474 nt4.1□□□□□ -1.75
RPL40BP0CH09 YDL023CYDL023C 321 nt4.1□□□□□ -1.75
RPL40BP0CH09 CAX4YGR036C 720 nt4.1□□□□□ -1.75
RPL40BP0CH09 HPM1YIL110W 1134 nt4.1□□□□□ -1.75
RPL40BP0CH09 SGN1YIR001C 753 nt4.1□□□□□ -1.75
RPL40BP0CH09 CWC25YNL245C 540 nt4.1□□□□□ -1.75
RPL40BP0CH09 RDL1YOR285W 420 nt4.1□□□□□ -1.75
RPL40BP0CH09 MET17YLR303W 1335 nt4.1□□□□□ -1.75
RPL40BP0CH09 SUP35YDR172W 2058 nt4.1□□□□□ -1.75
RPL40BP0CH09 SFI1YLL003W 2841 nt4.1□□□□□ -1.75
RPL40BP0CH09 VBA2YBR293W 1425 nt4.1□□□□□ -1.75
RPL40BP0CH09 SEG2YKL105C 3399 nt4.09□□□□□ -1.75
RPL40BP0CH09 FLC1YPL221W 2382 nt4.09□□□□□ -1.75
RPL40BP0CH09 YDR391CYDR391C 699 nt4.09□□□□□ -1.75
RPL40BP0CH09 BUD25YER014C-A 462 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)CtK(CUU)C 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)D1tK(CUU)D1 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)D2tK(CUU)D2 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)E1tK(CUU)E1 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)E2tK(CUU)E2 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)FtK(CUU)F 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)G1tK(CUU)G1 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)G2tK(CUU)G2 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)G3tK(CUU)G3 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)ItK(CUU)I 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)JtK(CUU)J 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)KtK(CUU)K 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)MtK(CUU)M 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 tK(CUU)PtK(CUU)P 73 nt4.09□□□□□ -1.75
RPL40BP0CH09 FMP46YKR049C 402 nt4.09□□□□□ -1.75
RPL40BP0CH09 YPL113CYPL113C 1191 nt4.09□□□□□ -1.75
RPL40BP0CH09 OPT1YJL212C 2400 nt4.09□□□□□ -1.76
RPL40BP0CH09 YMR196WYMR196W 3267 nt4.08□□□□□ -1.76
RPL40BP0CH09 LRG1YDL240W 3054 nt4.08□□□□□ -1.76
RPL40BP0CH09 API2YDR525W 330 nt4.08□□□□□ -1.76
RPL40BP0CH09 COX17YLL009C 210 nt4.08□□□□□ -1.76
RPL40BP0CH09 RFA2YNL312W 822 nt4.08□□□□□ -1.76
RPL40BP0CH09 YOR131CYOR131C 657 nt4.08□□□□□ -1.76
RPL40BP0CH09 HOS1YPR068C 1413 nt4.08□□□□□ -1.76
RPL40BP0CH09 ISR1YPR106W 1332 nt4.08□□□□□ -1.76
RPL40BP0CH09 ARC40YBR234C 1155 nt4.08□□□□□ -1.76
RPL40BP0CH09 SIT1YEL065W 1887 nt4.07□□□□□ -1.76
RPL40BP0CH09 YPL260WYPL260W 1656 nt4.07□□□□□ -1.76
RPL40BP0CH09 RIP1YEL024W 648 nt4.07□□□□□ -1.76
RPL40BP0CH09 IES6YEL044W 501 nt4.07□□□□□ -1.76
RPL40BP0CH09 YJR038CYJR038C 363 nt4.07□□□□□ -1.76
RPL40BP0CH09 RAD4YER162C 2265 nt4.07□□□□□ -1.76
RPL40BP0CH09 TAF5YBR198C 2397 nt4.06□□□□□ -1.76
RPL40BP0CH09 OLE1YGL055W 1533 nt4.06□□□□□ -1.76
RPL40BP0CH09 DRS1YLL008W 2259 nt4.06□□□□□ -1.76
RPL40BP0CH09 WTM2YOR229W 1404 nt4.06□□□□□ -1.76
RPL40BP0CH09 HNT2YDR305C 654 nt4.06□□□□□ -1.76
RPL40BP0CH09 YPL041CYPL041C 624 nt4.06□□□□□ -1.76
RPL40BP0CH09 GCR1YPL075W 2358 nt4.06□□□□□ -1.76
RPL40BP0CH09 ENP1YBR247C 1452 nt4.05□□□□□ -1.76
RPL40BP0CH09 MSW1YDR268W 1140 nt4.05□□□□□ -1.76
RPL40BP0CH09 BAT2YJR148W 1131 nt4.05□□□□□ -1.76
RPL40BP0CH09 PRD1YCL057W 2139 nt4.05□□□□□ -1.76
RPL40BP0CH09 NUP2YLR335W 2163 nt4.04□□□□□ -1.76
RPL40BP0CH09 PHO87YCR037C 2772 nt4.04□□□□□ -1.76
RPL40BP0CH09 CWH43YCR017C 2862 nt4.04□□□□□ -1.76
RPL40BP0CH09 PCT1YGR202C 1275 nt4.04□□□□□ -1.76
RPL40BP0CH09 DPH1YIL103W 1278 nt4.04□□□□□ -1.76
RPL40BP0CH09 GTT2YLL060C 702 nt4.04□□□□□ -1.76
RPL40BP0CH09 HMX1YLR205C 954 nt4.04□□□□□ -1.76
RPL40BP0CH09 BUD17YNR027W 954 nt4.04□□□□□ -1.76
RPL40BP0CH09 YPR109WYPR109W 885 nt4.04□□□□□ -1.76
RPL40BP0CH09 RPO26YPR187W 468 nt4.04□□□□□ -1.76
RPL40BP0CH09 DEF1YKL054C 2217 nt4.04□□□□□ -1.76
RPL40BP0CH09 YER158CYER158C 1722 nt4.04□□□□□ -1.76
RPL40BP0CH09 CTT1YGR088W 1689 nt4.03□□□□□ -1.76
RPL40BP0CH09 EAR1YMR171C 1653 nt4.03□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms