Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.12■■□□□ 1.61
CD4P01730 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.12■■□□□ 1.61
CD4P01730 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CD4P01730 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CD4P01730 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CD4P01730 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.12■■□□□ 1.61
CD4P01730 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.12■■□□□ 1.61
CD4P01730 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CD4P01730 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CD4P01730 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CD4P01730 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CD4P01730 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CD4P01730 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.11■■□□□ 1.61
CD4P01730 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.11■■□□□ 1.61
CD4P01730 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CD4P01730 SLC47A1P1-202ENST00000449666 945 ntBASIC25.11■■□□□ 1.61
CD4P01730 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.11■■□□□ 1.61
CD4P01730 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.11■■□□□ 1.61
CD4P01730 pRNA.6-201ENST00000610482 90 ntBASIC25.11■■□□□ 1.61
CD4P01730 pRNA.5-201ENST00000612139 90 ntBASIC25.11■■□□□ 1.61
CD4P01730 pRNA.11-201ENST00000618423 90 ntBASIC25.11■■□□□ 1.61
CD4P01730 pRNA.13-201ENST00000619112 90 ntBASIC25.11■■□□□ 1.61
CD4P01730 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CD4P01730 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CD4P01730 TSPY26P-201ENST00000476365 1326 ntBASIC25.11■■□□□ 1.61
CD4P01730 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.1■■□□□ 1.61
CD4P01730 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CD4P01730 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CD4P01730 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CD4P01730 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.1■■□□□ 1.61
CD4P01730 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CD4P01730 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CD4P01730 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CD4P01730 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CD4P01730 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.1■■□□□ 1.61
CD4P01730 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CD4P01730 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CD4P01730 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CD4P01730 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.09■■□□□ 1.61
CD4P01730 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.09■■□□□ 1.61
CD4P01730 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.09■■□□□ 1.61
CD4P01730 AC027612.3-201ENST00000413684 1047 ntBASIC25.09■■□□□ 1.61
CD4P01730 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.09■■□□□ 1.61
CD4P01730 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.09■■□□□ 1.61
CD4P01730 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.09■■□□□ 1.61
CD4P01730 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CD4P01730 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.08■■□□□ 1.61
CD4P01730 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CD4P01730 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CD4P01730 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
CD4P01730 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CD4P01730 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.08■■□□□ 1.61
CD4P01730 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CD4P01730 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.08■■□□□ 1.61
CD4P01730 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.08■■□□□ 1.61
CD4P01730 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CD4P01730 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.08■■□□□ 1.61
CD4P01730 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CD4P01730 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.08■■□□□ 1.6
CD4P01730 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.08■■□□□ 1.6
CD4P01730 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.07■■□□□ 1.6
CD4P01730 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CD4P01730 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CD4P01730 AC123595.1-201ENST00000440769 1046 ntBASIC25.07■■□□□ 1.6
CD4P01730 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.07■■□□□ 1.6
CD4P01730 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
CD4P01730 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.07■■□□□ 1.6
CD4P01730 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CD4P01730 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CD4P01730 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CD4P01730 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CD4P01730 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CD4P01730 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CD4P01730 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CD4P01730 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.06■■□□□ 1.6
CD4P01730 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.06■■□□□ 1.6
CD4P01730 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CD4P01730 AL358852.1-201ENST00000623174 1268 ntBASIC25.06■■□□□ 1.6
CD4P01730 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CD4P01730 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CD4P01730 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CD4P01730 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CD4P01730 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CD4P01730 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CD4P01730 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.05■■□□□ 1.6
CD4P01730 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.05■■□□□ 1.6
CD4P01730 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
CD4P01730 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
CD4P01730 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.05■■□□□ 1.6
CD4P01730 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
CD4P01730 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CD4P01730 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD4P01730 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.04■■□□□ 1.6
CD4P01730 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CD4P01730 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD4P01730 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD4P01730 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.04■■□□□ 1.6
CD4P01730 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.04■■□□□ 1.6
CD4P01730 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CD4P01730 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms