Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLPXO76031 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLPXO76031 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.42■□□□□ 0.86
CLPXO76031 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.42■□□□□ 0.86
CLPXO76031 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.42■□□□□ 0.86
CLPXO76031 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CLPXO76031 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.41■□□□□ 0.86
CLPXO76031 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLPXO76031 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLPXO76031 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.41■□□□□ 0.86
CLPXO76031 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLPXO76031 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CLPXO76031 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLPXO76031 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLPXO76031 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLPXO76031 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLPXO76031 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLPXO76031 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLPXO76031 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLPXO76031 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLPXO76031 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLPXO76031 RARRES2P2-201ENST00000394842 485 ntBASIC20.4■□□□□ 0.86
CLPXO76031 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLPXO76031 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CLPXO76031 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.4■□□□□ 0.86
CLPXO76031 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLPXO76031 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLPXO76031 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CLPXO76031 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLPXO76031 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLPXO76031 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.39■□□□□ 0.86
CLPXO76031 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.39■□□□□ 0.86
CLPXO76031 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.39■□□□□ 0.86
CLPXO76031 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLPXO76031 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLPXO76031 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLPXO76031 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLPXO76031 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLPXO76031 AC126177.7-201ENST00000547904 679 ntBASIC20.39■□□□□ 0.85
CLPXO76031 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLPXO76031 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLPXO76031 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLPXO76031 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLPXO76031 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLPXO76031 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.38■□□□□ 0.85
CLPXO76031 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.38■□□□□ 0.85
CLPXO76031 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLPXO76031 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.38■□□□□ 0.85
CLPXO76031 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLPXO76031 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLPXO76031 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLPXO76031 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLPXO76031 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPXO76031 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLPXO76031 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CLPXO76031 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLPXO76031 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.37■□□□□ 0.85
CLPXO76031 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.37■□□□□ 0.85
CLPXO76031 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLPXO76031 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPXO76031 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLPXO76031 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLPXO76031 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPXO76031 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPXO76031 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPXO76031 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CLPXO76031 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPXO76031 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CLPXO76031 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPXO76031 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPXO76031 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CLPXO76031 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.36■□□□□ 0.85
CLPXO76031 GPX1-201ENST00000419349 1106 ntBASIC20.36■□□□□ 0.85
CLPXO76031 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.36■□□□□ 0.85
CLPXO76031 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPXO76031 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPXO76031 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLPXO76031 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLPXO76031 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPXO76031 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPXO76031 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPXO76031 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPXO76031 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLPXO76031 ABHD17AP5-201ENST00000580133 923 ntBASIC20.35■□□□□ 0.85
CLPXO76031 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLPXO76031 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CLPXO76031 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CLPXO76031 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPXO76031 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLPXO76031 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPXO76031 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPXO76031 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CLPXO76031 AL359258.2-201ENST00000564063 1566 ntBASIC20.34■□□□□ 0.85
CLPXO76031 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPXO76031 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPXO76031 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPXO76031 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLPXO76031 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLPXO76031 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLPXO76031 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms