Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.05■■□□□ 1.92
FOXN1O15353 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
FOXN1O15353 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.05■■□□□ 1.92
FOXN1O15353 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
FOXN1O15353 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.05■■□□□ 1.92
FOXN1O15353 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.05■■□□□ 1.92
FOXN1O15353 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
FOXN1O15353 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
FOXN1O15353 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
FOXN1O15353 AC027612.3-201ENST00000413684 1047 ntBASIC27.04■■□□□ 1.92
FOXN1O15353 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.04■■□□□ 1.92
FOXN1O15353 CCDC92B-201ENST00000575506 885 ntBASIC27.04■■□□□ 1.92
FOXN1O15353 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC27.04■■□□□ 1.92
FOXN1O15353 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
FOXN1O15353 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
FOXN1O15353 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
FOXN1O15353 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.04■■□□□ 1.92
FOXN1O15353 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.04■■□□□ 1.92
FOXN1O15353 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.03■■□□□ 1.92
FOXN1O15353 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.03■■□□□ 1.92
FOXN1O15353 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
FOXN1O15353 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
FOXN1O15353 ARL16-209ENST00000573715 763 ntTSL 3 BASIC27.03■■□□□ 1.92
FOXN1O15353 ARL16-211ENST00000576135 694 ntTSL 3 BASIC27.03■■□□□ 1.92
FOXN1O15353 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.02■■□□□ 1.92
FOXN1O15353 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
FOXN1O15353 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
FOXN1O15353 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.02■■□□□ 1.92
FOXN1O15353 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
FOXN1O15353 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
FOXN1O15353 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
FOXN1O15353 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.02■■□□□ 1.92
FOXN1O15353 BX842568.3-201ENST00000418104 571 ntBASIC27.02■■□□□ 1.92
FOXN1O15353 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
FOXN1O15353 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
FOXN1O15353 CD99P1-205ENST00000527459 561 ntBASIC27.02■■□□□ 1.92
FOXN1O15353 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC27.02■■□□□ 1.92
FOXN1O15353 AC136469.2-201ENST00000623944 1028 ntBASIC27.02■■□□□ 1.92
FOXN1O15353 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
FOXN1O15353 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.02■■□□□ 1.92
FOXN1O15353 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC27.02■■□□□ 1.92
FOXN1O15353 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
FOXN1O15353 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
FOXN1O15353 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.01■■□□□ 1.91
FOXN1O15353 CDCA4P2-201ENST00000441182 718 ntBASIC27.01■■□□□ 1.91
FOXN1O15353 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.01■■□□□ 1.91
FOXN1O15353 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.01■■□□□ 1.91
FOXN1O15353 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
FOXN1O15353 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
FOXN1O15353 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
FOXN1O15353 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
FOXN1O15353 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
FOXN1O15353 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
FOXN1O15353 AC022211.4-201ENST00000625094 2161 ntBASIC27■■□□□ 1.91
FOXN1O15353 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
FOXN1O15353 HES6-206ENST00000409574 738 ntTSL 2 BASIC27■■□□□ 1.91
FOXN1O15353 MAP2K4P1-201ENST00000438453 1195 ntBASIC27■■□□□ 1.91
FOXN1O15353 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.99■■□□□ 1.91
FOXN1O15353 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
FOXN1O15353 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
FOXN1O15353 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC26.99■■□□□ 1.91
FOXN1O15353 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.99■■□□□ 1.91
FOXN1O15353 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.99■■□□□ 1.91
FOXN1O15353 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
FOXN1O15353 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.99■■□□□ 1.91
FOXN1O15353 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
FOXN1O15353 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 PPP1R14BP3-201ENST00000509033 445 ntBASIC26.98■■□□□ 1.91
FOXN1O15353 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.98■■□□□ 1.91
FOXN1O15353 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.98■■□□□ 1.91
FOXN1O15353 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 AC138932.3-201ENST00000567634 1902 ntBASIC26.98■■□□□ 1.91
FOXN1O15353 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
FOXN1O15353 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
FOXN1O15353 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
FOXN1O15353 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
FOXN1O15353 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
FOXN1O15353 AC093827.2-201ENST00000512654 315 ntBASIC26.97■■□□□ 1.91
FOXN1O15353 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.97■■□□□ 1.91
FOXN1O15353 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.97■■□□□ 1.91
FOXN1O15353 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
FOXN1O15353 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.97■■□□□ 1.91
FOXN1O15353 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.97■■□□□ 1.91
FOXN1O15353 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
FOXN1O15353 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.97■■□□□ 1.91
FOXN1O15353 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
FOXN1O15353 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
FOXN1O15353 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
FOXN1O15353 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
FOXN1O15353 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
FOXN1O15353 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
FOXN1O15353 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms