Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.39■□□□□ 0.86
SMAD9O15198 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.39■□□□□ 0.85
SMAD9O15198 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD9O15198 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD9O15198 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.39■□□□□ 0.85
SMAD9O15198 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD9O15198 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.39■□□□□ 0.85
SMAD9O15198 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMAD9O15198 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD9O15198 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
SMAD9O15198 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD9O15198 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.38■□□□□ 0.85
SMAD9O15198 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD9O15198 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD9O15198 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD9O15198 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMAD9O15198 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.38■□□□□ 0.85
SMAD9O15198 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.38■□□□□ 0.85
SMAD9O15198 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD9O15198 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SMAD9O15198 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD9O15198 AC005703.6-201ENST00000623265 1329 ntBASIC20.37■□□□□ 0.85
SMAD9O15198 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD9O15198 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD9O15198 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD9O15198 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD9O15198 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMAD9O15198 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.37■□□□□ 0.85
SMAD9O15198 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD9O15198 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD9O15198 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.36■□□□□ 0.85
SMAD9O15198 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD9O15198 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD9O15198 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD9O15198 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.36■□□□□ 0.85
SMAD9O15198 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMAD9O15198 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.36■□□□□ 0.85
SMAD9O15198 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.36■□□□□ 0.85
SMAD9O15198 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SMAD9O15198 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD9O15198 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.35■□□□□ 0.85
SMAD9O15198 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.35■□□□□ 0.85
SMAD9O15198 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.35■□□□□ 0.85
SMAD9O15198 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD9O15198 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SMAD9O15198 ABCB10P4-201ENST00000566803 2184 ntBASIC20.35■□□□□ 0.85
SMAD9O15198 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD9O15198 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD9O15198 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.35■□□□□ 0.85
SMAD9O15198 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMAD9O15198 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.34■□□□□ 0.85
SMAD9O15198 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD9O15198 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD9O15198 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD9O15198 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD9O15198 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD9O15198 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD9O15198 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD9O15198 AL117332.1-201ENST00000622628 974 ntBASIC20.34■□□□□ 0.85
SMAD9O15198 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.34■□□□□ 0.85
SMAD9O15198 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD9O15198 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD9O15198 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMAD9O15198 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD9O15198 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD9O15198 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.33■□□□□ 0.85
SMAD9O15198 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMAD9O15198 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.33■□□□□ 0.85
SMAD9O15198 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.33■□□□□ 0.85
SMAD9O15198 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.33■□□□□ 0.85
SMAD9O15198 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
SMAD9O15198 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SMAD9O15198 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD9O15198 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD9O15198 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMAD9O15198 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SMAD9O15198 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD9O15198 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD9O15198 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD9O15198 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.32■□□□□ 0.84
SMAD9O15198 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD9O15198 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD9O15198 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.32■□□□□ 0.84
SMAD9O15198 AC131212.1-201ENST00000613771 668 ntBASIC20.32■□□□□ 0.84
SMAD9O15198 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.32■□□□□ 0.84
SMAD9O15198 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD9O15198 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMAD9O15198 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMAD9O15198 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SMAD9O15198 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.31■□□□□ 0.84
SMAD9O15198 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.31■□□□□ 0.84
SMAD9O15198 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SMAD9O15198 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD9O15198 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMAD9O15198 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.31■□□□□ 0.84
SMAD9O15198 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.31■□□□□ 0.84
SMAD9O15198 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.31■□□□□ 0.84
SMAD9O15198 MIR3621-201ENST00000580529 85 ntBASIC20.31■□□□□ 0.84
SMAD9O15198 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.31■□□□□ 0.84
SMAD9O15198 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms