Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KPNA4O00629 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KPNA4O00629 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
KPNA4O00629 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KPNA4O00629 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
KPNA4O00629 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KPNA4O00629 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
KPNA4O00629 AC137767.1-201ENST00000602918 1920 ntBASIC20.97■□□□□ 0.95
KPNA4O00629 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KPNA4O00629 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KPNA4O00629 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
KPNA4O00629 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KPNA4O00629 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.96■□□□□ 0.95
KPNA4O00629 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KPNA4O00629 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KPNA4O00629 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KPNA4O00629 AC233723.2-201ENST00000623798 2106 ntBASIC20.96■□□□□ 0.95
KPNA4O00629 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KPNA4O00629 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KPNA4O00629 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KPNA4O00629 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KPNA4O00629 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.95■□□□□ 0.94
KPNA4O00629 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KPNA4O00629 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KPNA4O00629 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KPNA4O00629 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
KPNA4O00629 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KPNA4O00629 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KPNA4O00629 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA4O00629 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.94■□□□□ 0.94
KPNA4O00629 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
KPNA4O00629 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
KPNA4O00629 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA4O00629 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA4O00629 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA4O00629 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
KPNA4O00629 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA4O00629 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA4O00629 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA4O00629 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA4O00629 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KPNA4O00629 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA4O00629 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.93■□□□□ 0.94
KPNA4O00629 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA4O00629 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA4O00629 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.93■□□□□ 0.94
KPNA4O00629 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.93■□□□□ 0.94
KPNA4O00629 BHLHE23-202ENST00000612929 1109 ntBASIC20.93■□□□□ 0.94
KPNA4O00629 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
KPNA4O00629 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA4O00629 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KPNA4O00629 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA4O00629 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA4O00629 AL121603.2-201ENST00000557373 2117 ntBASIC20.92■□□□□ 0.94
KPNA4O00629 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.92■□□□□ 0.94
KPNA4O00629 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA4O00629 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA4O00629 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA4O00629 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KPNA4O00629 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KPNA4O00629 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.91■□□□□ 0.94
KPNA4O00629 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KPNA4O00629 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KPNA4O00629 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
KPNA4O00629 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KPNA4O00629 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.91■□□□□ 0.94
KPNA4O00629 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KPNA4O00629 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.9■□□□□ 0.94
KPNA4O00629 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.9■□□□□ 0.94
KPNA4O00629 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.9■□□□□ 0.94
KPNA4O00629 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.9■□□□□ 0.94
KPNA4O00629 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.9■□□□□ 0.94
KPNA4O00629 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 AC004987.1-201ENST00000428627 508 ntBASIC20.9■□□□□ 0.94
KPNA4O00629 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KPNA4O00629 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
KPNA4O00629 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
KPNA4O00629 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KPNA4O00629 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KPNA4O00629 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KPNA4O00629 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KPNA4O00629 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.89■□□□□ 0.94
KPNA4O00629 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA4O00629 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
KPNA4O00629 ATP5G2P3-201ENST00000429083 425 ntBASIC20.89■□□□□ 0.93
KPNA4O00629 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.89■□□□□ 0.93
KPNA4O00629 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.89■□□□□ 0.93
KPNA4O00629 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA4O00629 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KPNA4O00629 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms