Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 SLC47A1P1-202ENST00000449666 945 ntBASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 AC022517.1-201ENST00000592429 346 ntBASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 AL358852.1-201ENST00000623174 1268 ntBASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCDC187A0A096LP49 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 KRT18P5-201ENST00000436075 1291 ntBASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 AL137784.2-201ENST00000607332 1000 ntBASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 RARRES2P11-201ENST00000635158 484 ntBASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 ALDH1A3-203ENST00000557963 1670 ntBASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCDC187A0A096LP49 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.52■■□□□ 1.03
CCDC187A0A096LP49 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCDC187A0A096LP49 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
CCDC187A0A096LP49 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 AC090192.1-201ENST00000517740 490 ntBASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC187A0A096LP49 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 AC027612.3-201ENST00000413684 1047 ntBASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 IGHV3-19-201ENST00000521488 291 ntBASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 IKBKGP1-201ENST00000612193 1073 ntBASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 AL031602.1-201ENST00000633169 911 ntBASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC187A0A096LP49 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 HLA-L-211ENST00000482052 1765 ntBASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 AC123595.1-201ENST00000440769 1046 ntBASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC187A0A096LP49 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC187A0A096LP49 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC187A0A096LP49 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC187A0A096LP49 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC187A0A096LP49 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC187A0A096LP49 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC187A0A096LP49 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCDC187A0A096LP49 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC187A0A096LP49 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC187A0A096LP49 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC187A0A096LP49 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 MIR572-201ENST00000384983 95 ntBASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 DUX4L2-201ENST00000561772 1275 ntBASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 DUX4L6-201ENST00000626483 1275 ntBASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 DUX4L1-201ENST00000627662 1275 ntBASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 DUX4L8-201ENST00000629013 1275 ntBASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 DUX4L3-201ENST00000630187 1275 ntBASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 DUX4L7-201ENST00000630678 1275 ntBASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 DUX4L5-201ENST00000630834 1275 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms