Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 AL592076.1-201ENST00000424448 303 ntBASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 RPL7P35-201ENST00000446943 740 ntBASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 RPL18AP3-201ENST00000462885 528 ntBASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 MIR4649-201ENST00000582839 64 ntBASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 AC021016.3-201ENST00000608367 477 ntBASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 AL591471.1-201ENST00000621855 229 ntBASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 AC005252.3-201ENST00000623855 2258 ntBASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RPAP1Q9BWH6 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 FTH1P22-201ENST00000456305 520 ntBASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 RN7SL81P-201ENST00000493781 261 ntBASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 CTBP2P4-201ENST00000513884 920 ntBASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 AC114947.1-202ENST00000514136 344 ntBASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 MIR4522-201ENST00000584932 87 ntBASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 LAP3P2-201ENST00000454686 1454 ntBASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.3■□□□□ 0.36
RPAP1Q9BWH6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 AL627389.1-201ENST00000413508 1182 ntBASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.29■□□□□ 0.36
RPAP1Q9BWH6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms