Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.81□□□□□ -0.36
VRK1Q99986 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 AC004466.1-201ENST00000599515 1080 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 ZACNP1-201ENST00000612259 710 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 AC005695.3-201ENST00000614522 232 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 AL096828.3-201ENST00000615354 462 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 AC244157.2-201ENST00000616239 1006 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 AC138466.3-201ENST00000619983 221 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
VRK1Q99986 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 CLUHP2-201ENST00000426660 1303 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 NUTM2HP-201ENST00000442076 2498 ntBASIC12.81□□□□□ -0.36
VRK1Q99986 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VRK1Q99986 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VRK1Q99986 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VRK1Q99986 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.8□□□□□ -0.36
VRK1Q99986 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
VRK1Q99986 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.8□□□□□ -0.36
VRK1Q99986 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
VRK1Q99986 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.8□□□□□ -0.36
VRK1Q99986 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.8□□□□□ -0.36
VRK1Q99986 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.8□□□□□ -0.36
VRK1Q99986 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 KRT8P13-201ENST00000463294 1010 ntBASIC12.8□□□□□ -0.36
VRK1Q99986 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.8□□□□□ -0.36
VRK1Q99986 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 AC106820.3-201ENST00000561653 397 ntBASIC12.8□□□□□ -0.36
VRK1Q99986 C2orf69P2-201ENST00000562032 1123 ntBASIC12.8□□□□□ -0.36
VRK1Q99986 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 AC073413.1-201ENST00000603927 732 ntBASIC12.8□□□□□ -0.36
VRK1Q99986 AL008638.5-201ENST00000623814 1298 ntBASIC12.8□□□□□ -0.36
VRK1Q99986 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
VRK1Q99986 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
VRK1Q99986 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.8□□□□□ -0.36
VRK1Q99986 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
VRK1Q99986 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
VRK1Q99986 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VRK1Q99986 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
VRK1Q99986 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.79□□□□□ -0.36
VRK1Q99986 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.79□□□□□ -0.36
VRK1Q99986 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VRK1Q99986 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms