Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 AC007969.1-201ENST00000433675 447 ntBASIC12.8□□□□□ -0.36
RFT1Q96AA3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 AL132655.2-201ENST00000596276 594 ntBASIC12.8□□□□□ -0.36
RFT1Q96AA3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 REXO1L1P-201ENST00000379010 6598 ntBASIC12.8□□□□□ -0.36
RFT1Q96AA3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.8□□□□□ -0.36
RFT1Q96AA3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFT1Q96AA3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AC092053.3-201ENST00000641308 4975 ntBASIC12.79□□□□□ -0.36
RFT1Q96AA3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AL442647.2-201ENST00000429864 857 ntBASIC12.79□□□□□ -0.36
RFT1Q96AA3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 SERBP1P5-201ENST00000510079 1181 ntBASIC12.79□□□□□ -0.36
RFT1Q96AA3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AC092552.1-201ENST00000547243 906 ntBASIC12.79□□□□□ -0.36
RFT1Q96AA3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AC004466.1-201ENST00000599515 1080 ntBASIC12.79□□□□□ -0.36
RFT1Q96AA3 AC133539.2-201ENST00000604757 467 ntBASIC12.79□□□□□ -0.36
RFT1Q96AA3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AP000437.1-201ENST00000624057 2085 ntBASIC12.79□□□□□ -0.36
RFT1Q96AA3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RFT1Q96AA3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.79□□□□□ -0.36
RFT1Q96AA3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RFT1Q96AA3 MKRN5P-201ENST00000445263 1467 ntBASIC12.78□□□□□ -0.36
RFT1Q96AA3 AC007541.1-201ENST00000570282 1469 ntBASIC12.78□□□□□ -0.36
RFT1Q96AA3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RFT1Q96AA3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms