Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 AC098614.1-201ENST00000368528 745 ntBASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 AC005229.1-201ENST00000392885 409 ntBASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 ARSEP1-201ENST00000420443 635 ntBASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 TMEM198B-204ENST00000484016 896 ntBASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 AC027237.1-201ENST00000560942 655 ntBASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 MIR4683-201ENST00000579659 81 ntBASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 LINC02486-201ENST00000604157 3000 ntBASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC50Q8IVM0 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 AC027307.3-201ENST00000594262 1100 ntBASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 AC023794.5-201ENST00000564380 2157 ntBASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC50Q8IVM0 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 AC064801.2-201ENST00000625052 1303 ntBASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 BEND3P3-201ENST00000611030 2440 ntBASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC50Q8IVM0 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms