Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 RN7SL837P-201ENST00000463010 287 ntBASIC17.23■□□□□ 0.35
NCLP19338 RPL13AP25-201ENST00000484130 612 ntBASIC17.23■□□□□ 0.35
NCLP19338 AC026434.2-201ENST00000506094 1078 ntBASIC17.23■□□□□ 0.35
NCLP19338 AC104596.2-201ENST00000512793 793 ntBASIC17.23■□□□□ 0.35
NCLP19338 AP001582.1-201ENST00000525856 295 ntBASIC17.23■□□□□ 0.35
NCLP19338 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.23■□□□□ 0.35
NCLP19338 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.23■□□□□ 0.35
NCLP19338 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.23■□□□□ 0.35
NCLP19338 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 AC093813.1-201ENST00000605066 256 ntBASIC17.23■□□□□ 0.35
NCLP19338 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.23■□□□□ 0.35
NCLP19338 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCLP19338 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
NCLP19338 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC17.22■□□□□ 0.35
NCLP19338 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC17.22■□□□□ 0.35
NCLP19338 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.22■□□□□ 0.35
NCLP19338 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
NCLP19338 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.22■□□□□ 0.35
NCLP19338 AC015909.5-201ENST00000624336 2266 ntBASIC17.22■□□□□ 0.35
NCLP19338 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
NCLP19338 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.22■□□□□ 0.35
NCLP19338 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.22■□□□□ 0.35
NCLP19338 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.22■□□□□ 0.35
NCLP19338 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.22■□□□□ 0.35
NCLP19338 WFDC1-204ENST00000613603 549 ntBASIC17.22■□□□□ 0.35
NCLP19338 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
NCLP19338 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.22■□□□□ 0.35
NCLP19338 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NCLP19338 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NCLP19338 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 AC083964.2-201ENST00000623988 2396 ntBASIC17.22■□□□□ 0.35
NCLP19338 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC17.22■□□□□ 0.35
NCLP19338 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCLP19338 AC011840.2-201ENST00000563063 1520 ntBASIC17.21■□□□□ 0.35
NCLP19338 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NCLP19338 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NCLP19338 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NCLP19338 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
NCLP19338 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 AL118506.1-201ENST00000601296 3082 ntBASIC17.21■□□□□ 0.35
NCLP19338 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NCLP19338 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.21■□□□□ 0.35
NCLP19338 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NCLP19338 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 RNU1-114P-201ENST00000365297 166 ntBASIC17.21■□□□□ 0.35
NCLP19338 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NCLP19338 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.21■□□□□ 0.35
NCLP19338 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.21■□□□□ 0.35
NCLP19338 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.21■□□□□ 0.35
NCLP19338 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NCLP19338 AC022616.1-201ENST00000518688 554 ntBASIC17.21■□□□□ 0.35
NCLP19338 AC092552.1-201ENST00000547243 906 ntBASIC17.21■□□□□ 0.35
NCLP19338 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.21■□□□□ 0.35
NCLP19338 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.21■□□□□ 0.35
NCLP19338 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.21■□□□□ 0.35
NCLP19338 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.21■□□□□ 0.35
NCLP19338 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.21■□□□□ 0.35
NCLP19338 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms